BLASTX nr result

ID: Atractylodes22_contig00033217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033217
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   155   3e-36
ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatu...   153   1e-35
ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   151   5e-35

>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  155 bits (392), Expect = 3e-36
 Identities = 70/100 (70%), Positives = 79/100 (79%)
 Frame = -3

Query: 302 RGEILAYPEAVHLVNPIEPEFKDQVDDKYQYASELKDLRVHGWVCKDPLVGFWQITPSNE 123
           RG+ LAYPEAV LVNP+E EFK ++DDKYQY+ E KD+RVHGW+C DP VGFWQITPSNE
Sbjct: 179 RGQALAYPEAVLLVNPVESEFKGELDDKYQYSCENKDIRVHGWICMDPSVGFWQITPSNE 238

Query: 122 FRVGGPIKPELNSHVGPTTLAVFFSTHYGGTDLAIKLEEG 3
           FR GGP+K  L SHVGPTTL+VF S HY G DL  K   G
Sbjct: 239 FRSGGPVKQNLTSHVGPTTLSVFLSAHYSGEDLVPKFVAG 278


>ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492757|gb|AES73960.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 651

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/100 (70%), Positives = 78/100 (78%)
 Frame = -3

Query: 302 RGEILAYPEAVHLVNPIEPEFKDQVDDKYQYASELKDLRVHGWVCKDPLVGFWQITPSNE 123
           RG+ LAYPEAV LVNPIEPE K +VDDKYQY+ + KD +VHGW+C DP VGFW ITPSNE
Sbjct: 182 RGQALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQVHGWICMDPAVGFWLITPSNE 241

Query: 122 FRVGGPIKPELNSHVGPTTLAVFFSTHYGGTDLAIKLEEG 3
           FR GGP+K  L SHVGPTTLAVF S HY G DL  K + G
Sbjct: 242 FRSGGPVKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAG 281


>ref|XP_002301115.1| predicted protein [Populus trichocarpa] gi|222842841|gb|EEE80388.1|
           predicted protein [Populus trichocarpa]
          Length = 731

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/100 (69%), Positives = 82/100 (82%)
 Frame = -3

Query: 302 RGEILAYPEAVHLVNPIEPEFKDQVDDKYQYASELKDLRVHGWVCKDPLVGFWQITPSNE 123
           RGE LAYPEAV LVNP+E EFK +VDDKYQY+ E KDL+VHGW+C +P VGFWQITPSNE
Sbjct: 270 RGEPLAYPEAVLLVNPVEAEFKGEVDDKYQYSCENKDLQVHGWICFNPPVGFWQITPSNE 329

Query: 122 FRVGGPIKPELNSHVGPTTLAVFFSTHYGGTDLAIKLEEG 3
           FR GGP+K  L+SHVGP +LA+F S HY G D+ +KL+ G
Sbjct: 330 FRSGGPLKQNLSSHVGPISLAMFLSAHYSGEDMVLKLKPG 369


>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  153 bits (386), Expect = 2e-35
 Identities = 68/100 (68%), Positives = 79/100 (79%)
 Frame = -3

Query: 302 RGEILAYPEAVHLVNPIEPEFKDQVDDKYQYASELKDLRVHGWVCKDPLVGFWQITPSNE 123
           RG+ LAYPEAV LVNP+EP+FK +VDDKYQY+ E KD +VHGW+C DP VGFWQITPS+E
Sbjct: 160 RGQPLAYPEAVQLVNPVEPDFKGEVDDKYQYSIENKDNKVHGWICMDPAVGFWQITPSDE 219

Query: 122 FRVGGPIKPELNSHVGPTTLAVFFSTHYGGTDLAIKLEEG 3
           FR GGP+K  L SHVGPTTL +F S HY G DL  K+  G
Sbjct: 220 FRSGGPVKQNLTSHVGPTTLVMFLSAHYSGEDLVPKIGAG 259


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/100 (69%), Positives = 77/100 (77%)
 Frame = -3

Query: 302 RGEILAYPEAVHLVNPIEPEFKDQVDDKYQYASELKDLRVHGWVCKDPLVGFWQITPSNE 123
           +G+ LAYPEAV LVNPIEPE K +VDDKYQY+ + KD +VHGW+C DP VGFW ITPSNE
Sbjct: 179 KGKALAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQVHGWICMDPAVGFWLITPSNE 238

Query: 122 FRVGGPIKPELNSHVGPTTLAVFFSTHYGGTDLAIKLEEG 3
           FR GGP+K  L SHVGPTTLAVF S HY G DL  K   G
Sbjct: 239 FRSGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFNSG 278


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