BLASTX nr result

ID: Atractylodes22_contig00033198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033198
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320112.1| white-brown-complex ABC transporter family [...    66   3e-09
ref|XP_002301347.1| white-brown-complex ABC transporter family [...    64   1e-08
ref|XP_002277271.1| PREDICTED: ABC transporter G family member 2...    61   8e-08
ref|XP_004149819.1| PREDICTED: ABC transporter G family member 1...    60   2e-07
ref|XP_003556547.1| PREDICTED: ABC transporter G family member 1...    58   7e-07

>ref|XP_002320112.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222860885|gb|EEE98427.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 738

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 48/106 (45%), Positives = 57/106 (53%), Gaps = 24/106 (22%)
 Frame = +3

Query: 144 MELQQLSRRPKHHISPTLGDLLQLVGDANA--------AHAH----------SQP--SPF 263
           MELQQ  RR K  +SPTLG+LL+ V DA +         H H          S P  SPF
Sbjct: 22  MELQQYPRRSKPSLSPTLGELLKRVEDAQSDTSIDSTPVHHHQALELGYACSSMPPSSPF 81

Query: 264 VLSFNSLTYSVKV----PRKISLSNSLGGSKVEVSNTKVLLDDISG 389
           VLSFN+LTYSVKV    P  +     L     E ++ KVLL+DISG
Sbjct: 82  VLSFNNLTYSVKVGQNMPFPVCGKEDLSHGSSETASMKVLLNDISG 127


>ref|XP_002301347.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222843073|gb|EEE80620.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 732

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 25/107 (23%)
 Frame = +3

Query: 144 MELQQLSRRPKHHISPTLGDLLQLVGDANA--------AHAH----------SQP--SPF 263
           MELQ   RR K  +SPTL +LL+ V DA +         H H          S P  +PF
Sbjct: 17  MELQNYPRRSKPSLSPTLAELLKRVDDAQSDTSNYSTPVHQHQVLELGFACSSMPPLTPF 76

Query: 264 VLSFNSLTYSVKVPRKISL-----SNSLGGSKVEVSNTKVLLDDISG 389
           VLSFN+L YSVKV +K+S       +SLG S  + S  KVLL+DISG
Sbjct: 77  VLSFNNLIYSVKVNQKLSFPFCGKDSSLGSS--DTSGMKVLLNDISG 121


>ref|XP_002277271.1| PREDICTED: ABC transporter G family member 2 [Vitis vinifera]
          Length = 722

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/111 (41%), Positives = 57/111 (51%), Gaps = 29/111 (26%)
 Frame = +3

Query: 144 MELQQLSRRPKHHISPTLGDLLQLVGDA-------------------NAAHAHSQPSPFV 266
           MELQ+   R K  +SPTLG+LL+ VGDA                   N A  H +  PFV
Sbjct: 1   MELQEPVWRSKLRVSPTLGELLKRVGDARDDTPGCQTTSSHQRVIDLNDAIPHPRSFPFV 60

Query: 267 LSFNSLTYSVKVPRKISLSN--------SLGGSKVEV--SNTKVLLDDISG 389
           LSF++L+YSVKV RK+             L   +VE   S  KVLL+DISG
Sbjct: 61  LSFHNLSYSVKVRRKMKFPGLFCWKEGPGLSEDEVETKDSGMKVLLNDISG 111


>ref|XP_004149819.1| PREDICTED: ABC transporter G family member 16-like [Cucumis
           sativus] gi|449518233|ref|XP_004166147.1| PREDICTED: ABC
           transporter G family member 16-like [Cucumis sativus]
          Length = 744

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 46/114 (40%), Positives = 57/114 (50%), Gaps = 36/114 (31%)
 Frame = +3

Query: 156 QLSRRPKHH--ISPTLGDLLQLVGDA-------------------NAAHAHSQPSPFVLS 272
           +L  RP+    +SPTLG LL+ VGD                    N A    +  PF+LS
Sbjct: 19  ELHDRPRSFAGLSPTLGQLLKRVGDVRREANGDGNETPVHQVLDINGASLEPRSLPFMLS 78

Query: 273 FNSLTYSVKVPRKISLS-------NSLGGSKVE--------VSNTKVLLDDISG 389
           FN+LTYSVKV RKIS S       N LGGS V+         + TK LL++ISG
Sbjct: 79  FNNLTYSVKVRRKISFSSVFHHRGNRLGGSPVDDTVVGDSLFTKTKTLLNNISG 132


>ref|XP_003556547.1| PREDICTED: ABC transporter G family member 1-like [Glycine max]
          Length = 750

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 46/113 (40%), Positives = 55/113 (48%), Gaps = 31/113 (27%)
 Frame = +3

Query: 144 MELQQLSRRPKHHISPTLGDLLQLVGDANAA-----------HAHSQPS------PFVLS 272
           MEL  L+RRP     PTLG LL+ VGD               HA   P       PFVLS
Sbjct: 25  MELDDLTRRPSAGDMPTLGQLLKHVGDVRKEASGDGSETPVHHALDIPGIEPRSLPFVLS 84

Query: 273 FNSLTYSVKVPRKISL-------SNSLGG-------SKVEVSNTKVLLDDISG 389
           F++LTYS+K  RK+SL       SN LG         +   + TK LL+DISG
Sbjct: 85  FSNLTYSIKSRRKMSLSSIFPRRSNRLGAVAEAPTVGESMFTRTKTLLNDISG 137


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