BLASTX nr result

ID: Atractylodes22_contig00033193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033193
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40495.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr...    89   4e-16
ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory pr...    89   4e-16
emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]    89   5e-16
ref|XP_002306885.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16

>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/78 (53%), Positives = 51/78 (65%)
 Frame = -2

Query: 235 SLPSTEDATGPIVXXXXXXXXXXXXXXXXXXXXXXKWEVFAKKKGIQNRKKDKLVFDEQT 56
           +LPSTED  GP+V                      KWE+FAK KGI+NRKKDK+V+DEQT
Sbjct: 53  NLPSTEDIDGPLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQT 112

Query: 55  SSWKRRYGYDRVNDDNDV 2
            +WKRR+GYDRVNDD D+
Sbjct: 113 GTWKRRHGYDRVNDDKDI 130


>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
           product [Vitis vinifera]
          Length = 327

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/78 (53%), Positives = 51/78 (65%)
 Frame = -2

Query: 235 SLPSTEDATGPIVXXXXXXXXXXXXXXXXXXXXXXKWEVFAKKKGIQNRKKDKLVFDEQT 56
           +LPSTED  GP+V                      KWE+FAK KGI+NRKKDK+V+DEQT
Sbjct: 53  NLPSTEDIDGPLVKLPPPTTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQT 112

Query: 55  SSWKRRYGYDRVNDDNDV 2
            +WKRR+GYDRVNDD D+
Sbjct: 113 GTWKRRHGYDRVNDDEDI 130


>ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera]
          Length = 331

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/78 (53%), Positives = 51/78 (65%)
 Frame = -2

Query: 235 SLPSTEDATGPIVXXXXXXXXXXXXXXXXXXXXXXKWEVFAKKKGIQNRKKDKLVFDEQT 56
           +LPSTED  GP+V                      KWE+FAK KGI+NRKKDK+V+DEQT
Sbjct: 56  NLPSTEDIDGPLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQT 115

Query: 55  SSWKRRYGYDRVNDDNDV 2
            +WKRR+GYDRVNDD D+
Sbjct: 116 GTWKRRHGYDRVNDDKDI 133


>emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]
          Length = 327

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/78 (53%), Positives = 51/78 (65%)
 Frame = -2

Query: 235 SLPSTEDATGPIVXXXXXXXXXXXXXXXXXXXXXXKWEVFAKKKGIQNRKKDKLVFDEQT 56
           +LPSTED  GP+V                      KWE+FAK KGI+NRKKDK+V+DEQT
Sbjct: 53  NLPSTEDIDGPLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQT 112

Query: 55  SSWKRRYGYDRVNDDNDV 2
            +WKRR+GYDRVNDD D+
Sbjct: 113 GTWKRRHGYDRVNDDKDJ 130


>ref|XP_002306885.1| predicted protein [Populus trichocarpa] gi|222856334|gb|EEE93881.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/78 (55%), Positives = 50/78 (64%)
 Frame = -2

Query: 235 SLPSTEDATGPIVXXXXXXXXXXXXXXXXXXXXXXKWEVFAKKKGIQNRKKDKLVFDEQT 56
           +LPSTED  GP+V                      +WE FAK KGI+NRKKDK+V+DEQT
Sbjct: 48  NLPSTEDIDGPLVKLPPPTTKLPREKPLPKPKPPTRWEQFAKAKGIRNRKKDKVVWDEQT 107

Query: 55  SSWKRRYGYDRVNDDNDV 2
            +WKRRYGYDRVNDD DV
Sbjct: 108 GTWKRRYGYDRVNDDADV 125


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