BLASTX nr result

ID: Atractylodes22_contig00033189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033189
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arab...    87   1e-15
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    86   2e-15
ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago trun...    86   4e-15
ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    85   7e-15
ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arabidopsis lyrata subsp.
           lyrata] gi|297318163|gb|EFH48585.1| hypothetical protein
           ARALYDRAFT_489660 [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +3

Query: 189 MSISSDLYPSPKDLPYEEELLRNPFRFKLWWGYLIAQTESPFKKRAVIYERA 344
           M+IS DLYPS +DL YEEELLRNPF  KLWW YLIA+ ESPFKKR +IYERA
Sbjct: 1   MAISKDLYPSQEDLLYEEELLRNPFSLKLWWRYLIAKAESPFKKRFIIYERA 52


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = +3

Query: 189 MSISSDLYPSPKDLPYEEELLRNPFRFKLWWGYLIAQTESPFKKRAVIYERA 344
           MSIS DLYPS  DL YEEELLRNPF  KLWW YLIA+ E+PFKKR +IYERA
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERA 52


>ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago truncatula]
           gi|355482496|gb|AES63699.1| Pre-mRNA-splicing factor
           SYF1 [Medicago truncatula]
          Length = 925

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +3

Query: 192 SISSDLYPSPKDLPYEEELLRNPFRFKLWWGYLIAQTESPFKKRAVIYERA 344
           +ISSDLYPS  DL YEEELLRNPF  KLWW YLIA+++SPFKKR +IYERA
Sbjct: 3   AISSDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFKKRFIIYERA 53


>ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 918

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/52 (75%), Positives = 44/52 (84%)
 Frame = +3

Query: 189 MSISSDLYPSPKDLPYEEELLRNPFRFKLWWGYLIAQTESPFKKRAVIYERA 344
           M+I+ DLYPS  DL YEEELLRNPF  KLWW YLIA++E+PFKKR VIYERA
Sbjct: 1   MAIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERA 52


>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/52 (75%), Positives = 43/52 (82%)
 Frame = +3

Query: 189 MSISSDLYPSPKDLPYEEELLRNPFRFKLWWGYLIAQTESPFKKRAVIYERA 344
           MSIS +LYPS  DL YEEE+LRNPF  KLWW YLIA+ ESPFKKR +IYERA
Sbjct: 1   MSISKELYPSQDDLLYEEEILRNPFSLKLWWRYLIARRESPFKKRFIIYERA 52


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