BLASTX nr result

ID: Atractylodes22_contig00033144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033144
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD94131.1| putative pattern formation protein EMB30 [Arabid...   327   2e-87
ref|NP_172851.1| Pattern formation protein EMB30 [Arabidopsis th...   327   2e-87
gb|AAA91150.1| GNOM [Arabidopsis thaliana]                            326   5e-87
ref|XP_002279665.1| PREDICTED: pattern formation protein EMB30-l...   324   2e-86
gb|ABP57378.1| GNOM-like 1 protein [Nicotiana tabacum]                323   3e-86

>dbj|BAD94131.1| putative pattern formation protein EMB30 [Arabidopsis thaliana]
          Length = 1289

 Score =  327 bits (839), Expect = 2e-87
 Identities = 165/300 (55%), Positives = 209/300 (69%)
 Frame = +3

Query: 3    MTHDNWVGLIHKSRQTTPYIICDSREPINNEMFAILSGPTXXXXXXXXXXXXXXXXXXTC 182
            MT   W+ L+HKS++T PYI+ DSR  ++++MFAI+SGPT                  TC
Sbjct: 596  MTPSRWIDLMHKSKKTAPYILADSRAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTC 655

Query: 183  INGFLNVAKIAGCYHXXXXXXXXXXXXXKFTTXXXXXXXXXXXXAFGNDAKAREATIGVF 362
            I+GFL +AKI+ C+H             KFTT            AFG+DAKAR ATI +F
Sbjct: 656  IDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVDEPVLAFGDDAKARMATITIF 715

Query: 363  TIANTYGDYIRSGWRNTVDCILSLHKLGLLPARLASDAADDLEHNSEPDTGKSVLLSPPA 542
            TIAN YGDYIR+GWRN +DCIL LHKLGLLPAR+ASDAAD+ EH+SE   GK +  S  +
Sbjct: 716  TIANKYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESEHSSEQGQGKPLANSLSS 775

Query: 543  PTVLASAHSRKSSGLMSRFSELLYYDTEKPAPQPSQEQLEAHKRAVETVKACHVNSIFTE 722
              + +    R+SSGLM RFS+LL  DTE+P  QP+++QL AH+R ++T++ CH++SIFTE
Sbjct: 776  AHLQSMGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTE 835

Query: 723  SKFLQSESLSNLARALILAAGQSHKGNNSVEDEEVAVFCLELLITVTLNNRDRIMLLWQG 902
            SKFLQ+ESL  LARALI AAG+  KG +S EDE+ AVFCLELLI +TLNNRDRI+LLWQG
Sbjct: 836  SKFLQAESLLQLARALIWAAGRPQKGTSSPEDEDTAVFCLELLIAITLNNRDRIVLLWQG 895


>ref|NP_172851.1| Pattern formation protein EMB30 [Arabidopsis thaliana]
            gi|334182567|ref|NP_001184991.1| Pattern formation
            protein EMB30 [Arabidopsis thaliana]
            gi|2498329|sp|Q42510.1|GNOM_ARATH RecName: Full=ARF
            guanine-nucleotide exchange factor GNOM; AltName:
            Full=Pattern formation protein EMB30; AltName:
            Full=Protein EMBRYO DEFECTIVE 30; AltName: Full=Protein
            MIZU-KUSSEI2; AltName: Full=Protein VASCULAR NETWORK 7
            gi|5080774|gb|AAD39284.1|AC007576_7 EMB30/GNOM gene
            product [Arabidopsis thaliana]
            gi|8778395|gb|AAF79403.1|AC068197_13 F16A14.20
            [Arabidopsis thaliana] gi|1209633|gb|AAA91151.1| GNOM
            [Arabidopsis thaliana] gi|1335997|gb|AAB01205.1| similar
            to the Saccharomyces cerevisiae Sec7 protein, GenBank
            Accession Number J03918 [Arabidopsis thaliana]
            gi|1335999|gb|AAB01206.1| similar to the Saccharomyces
            cerevisiae Sec7 protein, GenBank Accession Number J03918
            [Arabidopsis thaliana] gi|332190971|gb|AEE29092.1|
            Pattern formation protein EMB30 [Arabidopsis thaliana]
            gi|332190972|gb|AEE29093.1| Pattern formation protein
            EMB30 [Arabidopsis thaliana]
          Length = 1451

 Score =  327 bits (839), Expect = 2e-87
 Identities = 165/300 (55%), Positives = 209/300 (69%)
 Frame = +3

Query: 3    MTHDNWVGLIHKSRQTTPYIICDSREPINNEMFAILSGPTXXXXXXXXXXXXXXXXXXTC 182
            MT   W+ L+HKS++T PYI+ DSR  ++++MFAI+SGPT                  TC
Sbjct: 758  MTPSRWIDLMHKSKKTAPYILADSRAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTC 817

Query: 183  INGFLNVAKIAGCYHXXXXXXXXXXXXXKFTTXXXXXXXXXXXXAFGNDAKAREATIGVF 362
            I+GFL +AKI+ C+H             KFTT            AFG+DAKAR ATI +F
Sbjct: 818  IDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVDEPVLAFGDDAKARMATITIF 877

Query: 363  TIANTYGDYIRSGWRNTVDCILSLHKLGLLPARLASDAADDLEHNSEPDTGKSVLLSPPA 542
            TIAN YGDYIR+GWRN +DCIL LHKLGLLPAR+ASDAAD+ EH+SE   GK +  S  +
Sbjct: 878  TIANKYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESEHSSEQGQGKPLANSLSS 937

Query: 543  PTVLASAHSRKSSGLMSRFSELLYYDTEKPAPQPSQEQLEAHKRAVETVKACHVNSIFTE 722
              + +    R+SSGLM RFS+LL  DTE+P  QP+++QL AH+R ++T++ CH++SIFTE
Sbjct: 938  AHLQSMGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTE 997

Query: 723  SKFLQSESLSNLARALILAAGQSHKGNNSVEDEEVAVFCLELLITVTLNNRDRIMLLWQG 902
            SKFLQ+ESL  LARALI AAG+  KG +S EDE+ AVFCLELLI +TLNNRDRI+LLWQG
Sbjct: 998  SKFLQAESLLQLARALIWAAGRPQKGTSSPEDEDTAVFCLELLIAITLNNRDRIVLLWQG 1057


>gb|AAA91150.1| GNOM [Arabidopsis thaliana]
          Length = 1451

 Score =  326 bits (835), Expect = 5e-87
 Identities = 164/300 (54%), Positives = 208/300 (69%)
 Frame = +3

Query: 3    MTHDNWVGLIHKSRQTTPYIICDSREPINNEMFAILSGPTXXXXXXXXXXXXXXXXXXTC 182
            MT   W+ L+HKS++T PYI+ DSR  ++++MFAI+SGPT                  TC
Sbjct: 758  MTPSRWIDLMHKSKKTAPYILADSRAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTC 817

Query: 183  INGFLNVAKIAGCYHXXXXXXXXXXXXXKFTTXXXXXXXXXXXXAFGNDAKAREATIGVF 362
            I+GFL +AKI+ C+H             KFTT            AFG+D KAR ATI +F
Sbjct: 818  IDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVDEPVLAFGDDGKARMATITIF 877

Query: 363  TIANTYGDYIRSGWRNTVDCILSLHKLGLLPARLASDAADDLEHNSEPDTGKSVLLSPPA 542
            TIAN YGDYIR+GWRN +DCIL LHKLGLLPAR+ASDAAD+ EH+SE   GK +  S  +
Sbjct: 878  TIANKYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESEHSSEQGQGKPLANSLSS 937

Query: 543  PTVLASAHSRKSSGLMSRFSELLYYDTEKPAPQPSQEQLEAHKRAVETVKACHVNSIFTE 722
              + +    R+SSGLM RFS+LL  DTE+P  QP+++QL AH+R ++T++ CH++SIFTE
Sbjct: 938  AHLQSMGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTE 997

Query: 723  SKFLQSESLSNLARALILAAGQSHKGNNSVEDEEVAVFCLELLITVTLNNRDRIMLLWQG 902
            SKFLQ+ESL  LARALI AAG+  KG +S EDE+ AVFCLELLI +TLNNRDRI+LLWQG
Sbjct: 998  SKFLQAESLLQLARALIWAAGRPQKGTSSPEDEDTAVFCLELLIAITLNNRDRIVLLWQG 1057


>ref|XP_002279665.1| PREDICTED: pattern formation protein EMB30-like [Vitis vinifera]
          Length = 1470

 Score =  324 bits (831), Expect = 2e-86
 Identities = 164/300 (54%), Positives = 208/300 (69%)
 Frame = +3

Query: 3    MTHDNWVGLIHKSRQTTPYIICDSREPINNEMFAILSGPTXXXXXXXXXXXXXXXXXXTC 182
            MT   W+ L+HKS++T P+I+ DSR  ++++MFAI+SGPT                  TC
Sbjct: 762  MTPSRWIDLMHKSKKTAPFIVADSRAFLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTC 821

Query: 183  INGFLNVAKIAGCYHXXXXXXXXXXXXXKFTTXXXXXXXXXXXXAFGNDAKAREATIGVF 362
            I+GFL VAKI+ C+H             KFTT            AFG+D KAR AT+ VF
Sbjct: 822  IDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSPGEESVQAFGDDTKARMATVTVF 881

Query: 363  TIANTYGDYIRSGWRNTVDCILSLHKLGLLPARLASDAADDLEHNSEPDTGKSVLLSPPA 542
            TIAN YGDYIR+GWRN +DCIL LHKLGLLPAR+ASDAADD E +++P  GK +  S  +
Sbjct: 882  TIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADDSELSADPGQGKPITNSLSS 941

Query: 543  PTVLASAHSRKSSGLMSRFSELLYYDTEKPAPQPSQEQLEAHKRAVETVKACHVNSIFTE 722
              + +    R+SSGLM RFS+LL  DTE+P  QP+++QL AH+R ++T++ CH++SIFTE
Sbjct: 942  AHMPSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTE 1001

Query: 723  SKFLQSESLSNLARALILAAGQSHKGNNSVEDEEVAVFCLELLITVTLNNRDRIMLLWQG 902
            SKFLQS+SL  LARALI AAG+  KGN+S EDE+ AVFCLELLI +TLNNRDRI LLWQG
Sbjct: 1002 SKFLQSDSLLQLARALIWAAGRPQKGNSSPEDEDTAVFCLELLIAITLNNRDRIKLLWQG 1061


>gb|ABP57378.1| GNOM-like 1 protein [Nicotiana tabacum]
          Length = 1442

 Score =  323 bits (829), Expect = 3e-86
 Identities = 161/299 (53%), Positives = 203/299 (67%)
 Frame = +3

Query: 3    MTHDNWVGLIHKSRQTTPYIICDSREPINNEMFAILSGPTXXXXXXXXXXXXXXXXXXTC 182
            M   +W+GL+HKSRQT+P+I+CD    ++ +MF++LSGPT                  TC
Sbjct: 745  MAPSHWIGLVHKSRQTSPFIVCDQGPYLDYDMFSMLSGPTIASISVVLDHVEQEDVWQTC 804

Query: 183  INGFLNVAKIAGCYHXXXXXXXXXXXXXKFTTXXXXXXXXXXXXAFGNDAKAREATIGVF 362
            I+GFL +AKI+  Y              KFTT             F  D KAR AT+ VF
Sbjct: 805  IDGFLAIAKISASYSFDNVLDDLVVSLCKFTTLLLPSYTDDFIVTFAQDNKARLATLAVF 864

Query: 363  TIANTYGDYIRSGWRNTVDCILSLHKLGLLPARLASDAADDLEHNSEPDTGKSVLLSPPA 542
            TIAN YGD+IRSGW+N +DCILSLH  GLLP RL SDAADD+E  S+ D  K    SP A
Sbjct: 865  TIANKYGDHIRSGWKNILDCILSLHTFGLLPTRLFSDAADDVESTSDADQSKPAAASPSA 924

Query: 543  PTVLASAHSRKSSGLMSRFSELLYYDTEKPAPQPSQEQLEAHKRAVETVKACHVNSIFTE 722
            P V + A SRKSSGLM RFS+LLY D E+P PQP+++QL A ++ ++T++ CH++SIF E
Sbjct: 925  PHVPSLAPSRKSSGLMGRFSQLLYLDAEEPVPQPNEKQLAARQQTLQTIQNCHIDSIFAE 984

Query: 723  SKFLQSESLSNLARALILAAGQSHKGNNSVEDEEVAVFCLELLITVTLNNRDRIMLLWQ 899
            SKFLQ+ESLS L RAL++AAG+ HKGN S+E+EE AVFCLELLI +T+NNRDRIMLLWQ
Sbjct: 985  SKFLQAESLSQLVRALVMAAGRPHKGNFSLEEEETAVFCLELLIAITINNRDRIMLLWQ 1043


Top