BLASTX nr result

ID: Atractylodes22_contig00033020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033020
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop...   250   7e-65
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|2...   238   3e-61
ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleop...   236   2e-60
ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, pu...   233   9e-60
ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814...   228   5e-58

>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
           [Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
           protein product [Vitis vinifera]
          Length = 340

 Score =  250 bits (639), Expect = 7e-65
 Identities = 120/142 (84%), Positives = 132/142 (92%)
 Frame = +3

Query: 69  NGSKLNSVFYAQTYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPY 248
           +GS+ N+VFYA++YHPIQAGSIDGTD LPHDNAVYRALLCSSAGLYDP GDP VIG+ PY
Sbjct: 2   SGSRANAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKVIGD-PY 60

Query: 249 CTVFVGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYE 428
           CTVFVGHL+  TTEDTLHKAMSK+G VK+LRLVRHIVTGAS+GYAFVEYE+EREMRRAYE
Sbjct: 61  CTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREMRRAYE 120

Query: 429 KAHHSIIDDSEIIVDYNRQQLM 494
            AHHS+IDD EIIVDYNRQQLM
Sbjct: 121 DAHHSMIDDCEIIVDYNRQQLM 142


>ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|222837365|gb|EEE75744.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  238 bits (608), Expect = 3e-61
 Identities = 116/142 (81%), Positives = 123/142 (86%)
 Frame = +3

Query: 69  NGSKLNSVFYAQTYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPY 248
           +G  +NSVFYA  YHPIQAGSIDGTD  PHDNAVYRALLCSSAGLYDP GDP  IG+ PY
Sbjct: 2   SGRSINSVFYADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKAIGD-PY 60

Query: 249 CTVFVGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYE 428
           CT+FVG LS  TTEDTL KAMSKYG VKNLRLVRHIVTGASRGYAFVE+E+EREMRRAY+
Sbjct: 61  CTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREMRRAYK 120

Query: 429 KAHHSIIDDSEIIVDYNRQQLM 494
              HS IDDSEIIVDYNRQQLM
Sbjct: 121 DGQHSYIDDSEIIVDYNRQQLM 142


>ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
           protein-like [Cucumis sativus]
           gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12
           small nuclear ribonucleoprotein 35 kDa protein-like
           [Cucumis sativus]
          Length = 333

 Score =  236 bits (601), Expect = 2e-60
 Identities = 114/142 (80%), Positives = 126/142 (88%)
 Frame = +3

Query: 69  NGSKLNSVFYAQTYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPY 248
           +GS +N VFYA  YHPIQAGSIDGTDIL HDNAVYRALLCSSAGLYDP GDP V G+ PY
Sbjct: 2   SGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGD-PY 60

Query: 249 CTVFVGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYE 428
           CT+FVG LS  TTEDTL +AMSKYG VKNLRLVRHIVTG+SRGYAFVEYE+E+EM+RAY+
Sbjct: 61  CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 120

Query: 429 KAHHSIIDDSEIIVDYNRQQLM 494
            AHHS+IDD EIIVDYNRQ+LM
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLM 142


>ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
           communis] gi|223530750|gb|EEF32618.1| U1 small nuclear
           ribonucleoprotein 70 kD, putative [Ricinus communis]
          Length = 389

 Score =  233 bits (595), Expect = 9e-60
 Identities = 115/140 (82%), Positives = 126/140 (90%)
 Frame = +3

Query: 75  SKLNSVFYAQTYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPYCT 254
           +K+NSVFYA++YHPIQAGSIDGTDILPHDNA+YRA LC SAGLYDPLGDP VIG+ P+CT
Sbjct: 4   TKVNSVFYAKSYHPIQAGSIDGTDILPHDNAIYRAFLCFSAGLYDPLGDPKVIGD-PFCT 62

Query: 255 VFVGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYEKA 434
           +FVG LS  TTE+TL KAMSKYG V+NLRLVR IVTGASRGYAFVEY +EREMRRAY  A
Sbjct: 63  LFVGRLSHSTTENTLLKAMSKYGKVRNLRLVRDIVTGASRGYAFVEYGTEREMRRAYMDA 122

Query: 435 HHSIIDDSEIIVDYNRQQLM 494
           HHS IDDSEIIVDYNRQQLM
Sbjct: 123 HHSFIDDSEIIVDYNRQQLM 142


>ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
          Length = 347

 Score =  228 bits (580), Expect = 5e-58
 Identities = 111/138 (80%), Positives = 119/138 (86%)
 Frame = +3

Query: 81  LNSVFYAQTYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPLGDPNVIGENPYCTVF 260
           LNSVFYA +YHPIQAGSIDGTD++PHDNAVYRA LCSS GLYDP GDP   G+ PYCT+F
Sbjct: 8   LNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGD-PYCTLF 66

Query: 261 VGHLSQFTTEDTLHKAMSKYGTVKNLRLVRHIVTGASRGYAFVEYESEREMRRAYEKAHH 440
           V  LS+ TTED L K MSKYG VKNLRLVR IVTGASRGYAFVEYE+EREMRRAY  AHH
Sbjct: 67  VARLSRLTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHH 126

Query: 441 SIIDDSEIIVDYNRQQLM 494
            I+DDSEIIVDYNRQQLM
Sbjct: 127 LIVDDSEIIVDYNRQQLM 144


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