BLASTX nr result

ID: Atractylodes22_contig00033014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033014
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002307276.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002300320.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002299664.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    78   7e-13

>ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|222859068|gb|EEE96615.1|
           predicted protein [Populus trichocarpa]
          Length = 1497

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/90 (51%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 MAYRVQNHSLDIMVPGQENTGDALFIDIDSSVTPTCTYVPRQLSREELLKLLPEKWITNY 87
           MAYRVQNH+ D+++P    T DAL I +D++   TCT+VPRQ+ +E+L KLLP  WITNY
Sbjct: 233 MAYRVQNHAFDLVLPV---TNDALLITVDTNQRATCTHVPRQIPKEDLQKLLPSSWITNY 289

Query: 86  EQIHQA--PIQTTTTPDFIRHENGLVEVKF 3
           +++HQ+  PIQ +T P+F +  +G VE+ F
Sbjct: 290 KKLHQSSIPIQ-STEPEFTKKVDGTVEIIF 318


>ref|XP_002307276.1| predicted protein [Populus trichocarpa] gi|222856725|gb|EEE94272.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/80 (55%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
 Frame = -3

Query: 266 MAYRVQNHSLDIMVPGQENTGDALFIDIDSSVTPTCTYVPRQLSREELLKLLPEKWITNY 87
           MAYRVQNH+ D+++P    T DAL I +D++   TCT+VPRQ+ +E LLKLLP  WITNY
Sbjct: 226 MAYRVQNHAFDLVLPV---TNDALLITVDTNQRATCTHVPRQILKENLLKLLPSSWITNY 282

Query: 86  EQIHQA--PIQTTTTPDFIR 33
           E++HQ+  PIQ +T P+F +
Sbjct: 283 EKLHQSSVPIQ-STEPEFTK 301


>ref|XP_002300320.1| predicted protein [Populus trichocarpa] gi|222847578|gb|EEE85125.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 MAYRVQNHSLDIMVPGQENTGDALFIDIDSSVTPTCTYVPRQLSREELLKLLPEKWITNY 87
           MAYRVQNHS D+++P    T DAL I +D++    CT+V +Q+ +E+L KLLP  WITNY
Sbjct: 1   MAYRVQNHSFDLVLPV---TNDALLITVDTNQRAICTHVLQQIPKEDLQKLLPSSWITNY 57

Query: 86  EQIHQA--PIQTTTTPDFIRHENGLVEVKF 3
           E++HQ+  PIQ +T P+F +  +  VE+ F
Sbjct: 58  EKLHQSSIPIQ-STEPEFTKKADDTVEIIF 86


>ref|XP_002299664.1| predicted protein [Populus trichocarpa] gi|222846922|gb|EEE84469.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 MAYRVQNHSLDIMVPGQENTGDALFIDIDSSVTPTCTYVPRQLSREELLKLLPEKWITNY 87
           +AYRVQNH+ D+++P    T D L I +D +   T T+VPRQ+ + +L KLLP  WITNY
Sbjct: 136 LAYRVQNHAFDLVLPV---TNDVLLITVDINQRATYTHVPRQIPKSDLQKLLPFSWITNY 192

Query: 86  EQIHQA--PIQTTTTPDFIRHENGLVEVKF 3
           E +HQ+  PIQ +T P F +  +G +E+ F
Sbjct: 193 ENLHQSSVPIQ-STEPKFTKKVDGTIEIIF 221


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
           gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
           polyprotein; Contains: RecName: Full=Movement protein;
           Short=MP; Contains: RecName: Full=Capsid protein;
           Short=CP; Contains: RecName: Full=Aspartic protease;
           Short=PR; Contains: RecName: Full=Reverse transcriptase;
           Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
           [petunia vein clearing virus]
          Length = 2179

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/86 (44%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
 Frame = -3

Query: 266 MAYRVQNHSLDIMVPGQENTGDALFIDIDSSVTPT-CTYVPRQLSREELLKLLPEKWITN 90
           +A+RVQNH++D+ +PG E   +ALF+ ID+    T CT VPRQLS+E+L+K+LP+ W+TN
Sbjct: 220 IAWRVQNHAMDLTLPGGE---EALFLKIDAGSGATQCTQVPRQLSKEDLIKILPDSWVTN 276

Query: 89  YEQIH--QAPIQTTTTPDFIRHENGL 18
           YE++   + P+++T      RH+  +
Sbjct: 277 YEKLREPEEPLRSTEVSMSKRHDKSV 302


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