BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033006
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...   240   3e-61
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   239   8e-61
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   230   4e-58
gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]              226   5e-57
gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcrip...   226   5e-57

>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score =  240 bits (612), Expect = 3e-61
 Identities = 125/285 (43%), Positives = 173/285 (60%), Gaps = 11/285 (3%)
 Frame = -3

Query: 864  AFGCFERFKQKIERETSLKLRGLRTDRGGEFTSKDFAMFCEQVGIKRQLTTPYSPQQNGM 685
            AFG F+ FK  +E+ET  K++ LRTDRGGEF S++F  FCE+ GI R LT PY+PQQNG+
Sbjct: 493  AFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGIIRHLTAPYTPQQNGV 552

Query: 684  AERRNRTILEVTTSLLKTMEVPDTLWGEAVRHAVYILNRVPTKGVKGVTPYEGLRGNKPT 505
             ERRNRT+L +T S++K M VP+ LWGEA+RHA Y++NRV T+ +   TPYE L+  KP 
Sbjct: 553  VERRNRTLLGMTRSIMKHMSVPNYLWGEAIRHATYLINRVGTRALINQTPYEALKKKKPN 612

Query: 504  LEHLRVFGCVGFVKKTGSHLTKLSNRSNPMVHLGVESGTKAYRMFNPVEKKVVVSRDVIF 325
            +EHLRVFGCV + K    HL KL  RS  +V+LG E+G+KAY + +P  +K++VSRDV+F
Sbjct: 613  VEHLRVFGCVSYAKVEFPHLRKLDERSRILVYLGTETGSKAYTLLDPTTRKIIVSRDVVF 672

Query: 324  DEKTKWNWGLTQ--ESQPTVG-------PWWSKVQVSTALGEEIREQEKFGENNGSSTPR 172
            DE   W W  ++  E Q   G        + +  +V     EEI E E   E++ +    
Sbjct: 673  DENKSWKWANSELIEIQKEPGMFTLAQTEFHNNEEVENETSEEIEENE--AEDSTNKDAE 730

Query: 171  NGLADS--PSPIVSTPKPQSEQGGSSIFTPCTTTDSITSSGVSEE 43
            +GL +   P P  S   P   + G  +  P    D +  + +  E
Sbjct: 731  DGLDEPSVPEPNHSDDVPVFTRSGRQVIKPAHLNDYVLLAEIEGE 775


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  239 bits (609), Expect = 8e-61
 Identities = 119/252 (47%), Positives = 162/252 (64%), Gaps = 5/252 (1%)
 Frame = -3

Query: 861  FGCFERFKQKIERETSLKLRGLRTDRGGEFTSKDFAMFCEQVGIKRQLTTPYSPQQNGMA 682
            F  F+ FK  +E+E +  +  LRTDRGGEFTS+DF  +C   GI+R LT PY+PQQNG+ 
Sbjct: 438  FEKFKTFKALVEKEVNKVIVTLRTDRGGEFTSRDFQDYCNNNGIRRHLTAPYTPQQNGVV 497

Query: 681  ERRNRTILEVTTSLLKTMEVPDTLWGEAVRHAVYILNRVPTKGVKGVTPYEGLRGNKPTL 502
            ERRNRT++E+T S+LK M VP+ +WGEAVRHA Y++NRVPT+ +K  TPYE  +G KP++
Sbjct: 498  ERRNRTLMEMTRSMLKAMNVPNYMWGEAVRHATYLINRVPTRALKNQTPYESFKGRKPSI 557

Query: 501  EHLRVFGCVGFVKKTGSHLTKLSNRSNPMVHLGVESGTKAYRMFNPVEKKVVVSRDVIFD 322
             H+RVFGC+ + K   + L KL +RS  +VHLG+E G+KAYR++NP  +++VVSRDV FD
Sbjct: 558  GHIRVFGCLAYAKLDAALLKKLDDRSQTLVHLGIEPGSKAYRLYNPSTRRIVVSRDVKFD 617

Query: 321  EKTKWNW-----GLTQESQPTVGPWWSKVQVSTALGEEIREQEKFGENNGSSTPRNGLAD 157
            EK  WNW     G  +ES      W S +            QE   EN  + T +     
Sbjct: 618  EKACWNWNETDKGNQEESGKFHMTWGSSIDEGNGPFVIGSHQE---ENIATETEQQEETT 674

Query: 156  SPSPIVSTPKPQ 121
             P+P V   +P+
Sbjct: 675  EPTPEVDHVEPR 686


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108710383|gb|ABF98178.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  230 bits (586), Expect = 4e-58
 Identities = 106/188 (56%), Positives = 134/188 (71%)
 Frame = -3

Query: 864  AFGCFERFKQKIERETSLKLRGLRTDRGGEFTSKDFAMFCEQVGIKRQLTTPYSPQQNGM 685
            A   FE+FK   E      ++ LRTDRGGEF S +FA  C+  GI+R LT PYSPQQNG+
Sbjct: 551  ALAAFEKFKPLAENTAGRTIKTLRTDRGGEFLSGEFARVCDAAGIERHLTVPYSPQQNGV 610

Query: 684  AERRNRTILEVTTSLLKTMEVPDTLWGEAVRHAVYILNRVPTKGVKGVTPYEGLRGNKPT 505
             ERRNRT++ +  SLLK M VP  +WGEAVRHAV++LNR+PTK +   TP+E   G KP 
Sbjct: 611  VERRNRTVMAMARSLLKGMSVPGRMWGEAVRHAVFLLNRLPTKAMGNRTPFEAWTGKKPH 670

Query: 504  LEHLRVFGCVGFVKKTGSHLTKLSNRSNPMVHLGVESGTKAYRMFNPVEKKVVVSRDVIF 325
            L HLRVFGC    K T  HL KL +RSNP+V+LGVE G+KA+R+F+P  ++++VSRDV+F
Sbjct: 671  LGHLRVFGCTAHAKVTAPHLKKLDDRSNPVVYLGVEEGSKAHRLFDPRRRQIIVSRDVVF 730

Query: 324  DEKTKWNW 301
            DE T W W
Sbjct: 731  DENTPWQW 738


>gb|AAF79483.1|AC022492_27 F1L3.20 [Arabidopsis thaliana]
          Length = 1188

 Score =  226 bits (576), Expect = 5e-57
 Identities = 102/188 (54%), Positives = 138/188 (73%)
 Frame = -3

Query: 864  AFGCFERFKQKIERETSLKLRGLRTDRGGEFTSKDFAMFCEQVGIKRQLTTPYSPQQNGM 685
            AF  F  FK  +E+E+S +++  RTDRGGEF S +F  FCE+ GI R LT PY+PQQNG+
Sbjct: 482  AFQKFCNFKSLVEKESSTRVQTFRTDRGGEFVSHEFNSFCEKSGITRHLTAPYTPQQNGV 541

Query: 684  AERRNRTILEVTTSLLKTMEVPDTLWGEAVRHAVYILNRVPTKGVKGVTPYEGLRGNKPT 505
             ERRNRT++E+T S+LK M +P+ LWGEA+RH  Y+LNR+ T+ +K  TPYE  R  +PT
Sbjct: 542  VERRNRTMMEMTRSILKHMHLPNYLWGEAIRHTTYLLNRIITRSLKDKTPYECFRDRRPT 601

Query: 504  LEHLRVFGCVGFVKKTGSHLTKLSNRSNPMVHLGVESGTKAYRMFNPVEKKVVVSRDVIF 325
            +EH+R+FGC+ + K     L KL +RS  ++HLG E G+KAYR+F+P  +KVVVSRDV+F
Sbjct: 602  VEHIRIFGCIAYAKIDKQQLRKLDDRSRILIHLGTEPGSKAYRLFDPQTQKVVVSRDVVF 661

Query: 324  DEKTKWNW 301
            DE   W+W
Sbjct: 662  DEGKGWDW 669


>gb|AAF97299.1|AC007843_2 Similar to copia-type reverse transcriptase proteins [Arabidopsis
           thaliana]
          Length = 833

 Score =  226 bits (576), Expect = 5e-57
 Identities = 102/188 (54%), Positives = 138/188 (73%)
 Frame = -3

Query: 864 AFGCFERFKQKIERETSLKLRGLRTDRGGEFTSKDFAMFCEQVGIKRQLTTPYSPQQNGM 685
           AF  F  FK  +E+E+S +++  RTDRGGEF S +F  FCE+ GI R LT PY+PQQNG+
Sbjct: 100 AFQKFCNFKSLVEKESSTRVQTFRTDRGGEFVSHEFNSFCEKSGITRHLTAPYTPQQNGV 159

Query: 684 AERRNRTILEVTTSLLKTMEVPDTLWGEAVRHAVYILNRVPTKGVKGVTPYEGLRGNKPT 505
            ERRNRT++E+T S+LK M +P+ LWGEA+RH  Y+LNR+ T+ +K  TPYE  R  +PT
Sbjct: 160 VERRNRTMMEMTRSILKHMHLPNYLWGEAIRHTTYLLNRIITRSLKDKTPYECFRDRRPT 219

Query: 504 LEHLRVFGCVGFVKKTGSHLTKLSNRSNPMVHLGVESGTKAYRMFNPVEKKVVVSRDVIF 325
           +EH+R+FGC+ + K     L KL +RS  ++HLG E G+KAYR+F+P  +KVVVSRDV+F
Sbjct: 220 VEHIRIFGCIAYAKIDKQQLRKLDDRSRILIHLGTEPGSKAYRLFDPQTQKVVVSRDVVF 279

Query: 324 DEKTKWNW 301
           DE   W+W
Sbjct: 280 DEGKGWDW 287