BLASTX nr result

ID: Atractylodes22_contig00032917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032917
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37746.3| unnamed protein product [Vitis vinifera]              270   3e-70
ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containi...   270   3e-70
ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|2...   265   1e-68
gb|ABK95971.1| unknown [Populus trichocarpa]                          265   1e-68
ref|XP_002520932.1| pentatricopeptide repeat-containing protein,...   245   1e-62

>emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  270 bits (691), Expect = 3e-70
 Identities = 137/228 (60%), Positives = 169/228 (74%)
 Frame = +3

Query: 3    FHQISSKNVISFSAMIAAYGMNGLARDALCLLTEMEMHGLKPNSITILSVLSACSHGGLM 182
            F QI  KN++S+ AMIAA GMNGLARDAL LL+EM++HGLKPN +T LSVLSACSHGGL+
Sbjct: 497  FDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLV 556

Query: 183  EEGLSFFQRLIKTQEVKPNLEHYSCLVDLLSRCGKLDLAMELITQLAKGQKAGLSAWGAL 362
            EEGLSFF+ +++   V+P LEHYSC+VD+LSR GKL+ AM LI ++ +  + G   WGAL
Sbjct: 557  EEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGAL 616

Query: 363  LSGCRRSYNGNKEIEEKAVSSVLELEPNKSGGYMLASSMYAARGLWEDSARMRGLVREKH 542
            LS CR S  GN  +   A   VLELEP  S GY LASSMYAA GLW D+ARMR LV+ + 
Sbjct: 617  LSACRSS--GNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARG 674

Query: 543  VNVVAGYSMVYVNNKRCRFVAGDRNQILSNEIQATVEGLHECMKMEKR 686
            V VVAGYS+V+V +K  RFVAGD +   + EI   VE LH+CMK+ +R
Sbjct: 675  VRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQLHDCMKIAER 722



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 32/124 (25%), Positives = 67/124 (54%)
 Frame = +3

Query: 3   FHQISSKNVISFSAMIAAYGMNGLARDALCLLTEMEMHGLKPNSITILSVLSACSHGGLM 182
           F ++ +K+ +S+SAMIA +   G   +A+ L  EM     KPN +TILS+L A S    +
Sbjct: 396 FDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADL 455

Query: 183 EEGLSFFQRLIKTQEVKPNLEHYSCLVDLLSRCGKLDLAMELITQLAKGQKAGLSAWGAL 362
           +    +   +   + +   +   + ++D+ ++CG++ L+ +   Q+    +  + +WGA+
Sbjct: 456 KRS-KWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI---PEKNIVSWGAM 511

Query: 363 LSGC 374
           ++ C
Sbjct: 512 IAAC 515


>ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17210-like
            [Vitis vinifera]
          Length = 742

 Score =  270 bits (691), Expect = 3e-70
 Identities = 137/228 (60%), Positives = 169/228 (74%)
 Frame = +3

Query: 3    FHQISSKNVISFSAMIAAYGMNGLARDALCLLTEMEMHGLKPNSITILSVLSACSHGGLM 182
            F QI  KN++S+ AMIAA GMNGLARDAL LL+EM++HGLKPN +T LSVLSACSHGGL+
Sbjct: 511  FDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLV 570

Query: 183  EEGLSFFQRLIKTQEVKPNLEHYSCLVDLLSRCGKLDLAMELITQLAKGQKAGLSAWGAL 362
            EEGLSFF+ +++   V+P LEHYSC+VD+LSR GKL+ AM LI ++ +  + G   WGAL
Sbjct: 571  EEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGAL 630

Query: 363  LSGCRRSYNGNKEIEEKAVSSVLELEPNKSGGYMLASSMYAARGLWEDSARMRGLVREKH 542
            LS CR S  GN  +   A   VLELEP  S GY LASSMYAA GLW D+ARMR LV+ + 
Sbjct: 631  LSACRSS--GNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARG 688

Query: 543  VNVVAGYSMVYVNNKRCRFVAGDRNQILSNEIQATVEGLHECMKMEKR 686
            V VVAGYS+V+V +K  RFVAGD +   + EI   VE LH+CMK+ +R
Sbjct: 689  VRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQLHDCMKIAER 736



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 32/124 (25%), Positives = 67/124 (54%)
 Frame = +3

Query: 3   FHQISSKNVISFSAMIAAYGMNGLARDALCLLTEMEMHGLKPNSITILSVLSACSHGGLM 182
           F ++ +K+ +S+SAMIA +   G   +A+ L  EM     KPN +TILS+L A S    +
Sbjct: 410 FDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADL 469

Query: 183 EEGLSFFQRLIKTQEVKPNLEHYSCLVDLLSRCGKLDLAMELITQLAKGQKAGLSAWGAL 362
           +    +   +   + +   +   + ++D+ ++CG++ L+ +   Q+    +  + +WGA+
Sbjct: 470 KRS-KWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI---PEKNIVSWGAM 525

Query: 363 LSGC 374
           ++ C
Sbjct: 526 IAAC 529


>ref|XP_002328268.1| predicted protein [Populus trichocarpa] gi|222837783|gb|EEE76148.1|
            predicted protein [Populus trichocarpa]
          Length = 749

 Score =  265 bits (677), Expect = 1e-68
 Identities = 129/228 (56%), Positives = 177/228 (77%)
 Frame = +3

Query: 3    FHQISSKNVISFSAMIAAYGMNGLARDALCLLTEMEMHGLKPNSITILSVLSACSHGGLM 182
            F Q++ KN++++SAMIAAYGMNGLA +AL L  EM+ HGLKPN +T LSVL+ACSHGGL+
Sbjct: 510  FDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLV 569

Query: 183  EEGLSFFQRLIKTQEVKPNLEHYSCLVDLLSRCGKLDLAMELITQLAKGQKAGLSAWGAL 362
            EEGLS F+ +++   ++P  EHYSC+VD+L R GKLD A+E+I  +    K G S WG+L
Sbjct: 570  EEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSL 629

Query: 363  LSGCRRSYNGNKEIEEKAVSSVLELEPNKSGGYMLASSMYAARGLWEDSARMRGLVREKH 542
            LS C RSY G  E+ ++A+S VLELEP+ S GY++ASSMYAA GLW+D+AR+R L +EK 
Sbjct: 630  LSAC-RSY-GLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKG 687

Query: 543  VNVVAGYSMVYVNNKRCRFVAGDRNQILSNEIQATVEGLHECMKMEKR 686
            V VVAGYS+V+++NK CRFVAGD +   S+EI +  + LH+C+K++++
Sbjct: 688  VKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIFSMAQQLHDCIKIDEK 735


>gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  265 bits (677), Expect = 1e-68
 Identities = 129/228 (56%), Positives = 177/228 (77%)
 Frame = +3

Query: 3    FHQISSKNVISFSAMIAAYGMNGLARDALCLLTEMEMHGLKPNSITILSVLSACSHGGLM 182
            F Q++ KN++++SAMIAAYGMNGLA +AL L  EM+ HGLKPN +T LSVL+ACSHGGL+
Sbjct: 510  FDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLV 569

Query: 183  EEGLSFFQRLIKTQEVKPNLEHYSCLVDLLSRCGKLDLAMELITQLAKGQKAGLSAWGAL 362
            EEGLS F+ +++   ++P  EHYSC+VD+L R GKLD A+E+I  +    K G S WG+L
Sbjct: 570  EEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSL 629

Query: 363  LSGCRRSYNGNKEIEEKAVSSVLELEPNKSGGYMLASSMYAARGLWEDSARMRGLVREKH 542
            LS C RSY G  E+ ++A+S VLELEP+ S GY++ASSMYAA GLW+D+AR+R L +EK 
Sbjct: 630  LSAC-RSY-GLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKG 687

Query: 543  VNVVAGYSMVYVNNKRCRFVAGDRNQILSNEIQATVEGLHECMKMEKR 686
            V VVAGYS+V+++NK CRFVAGD +   S+EI +  + LH+C+K++++
Sbjct: 688  VKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIFSMAQQLHDCIKIDEK 735


>ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539898|gb|EEF41477.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 757

 Score =  245 bits (625), Expect = 1e-62
 Identities = 126/227 (55%), Positives = 168/227 (74%)
 Frame = +3

Query: 3    FHQISSKNVISFSAMIAAYGMNGLARDALCLLTEMEMHGLKPNSITILSVLSACSHGGLM 182
            F+QI  KN+I++S MIAAYGMNGLA +AL LL +M+ H +KPN++T LSVL+ACSHGGL+
Sbjct: 526  FNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLV 585

Query: 183  EEGLSFFQRLIKTQEVKPNLEHYSCLVDLLSRCGKLDLAMELITQLAKGQKAGLSAWGAL 362
            E GLS F+ +I+   V P  EHYSC+VD+LSR GKLD AMELI  + +  +AG S WGAL
Sbjct: 586  EMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGAL 645

Query: 363  LSGCRRSYNGNKEIEEKAVSSVLELEPNKSGGYMLASSMYAARGLWEDSARMRGLVREKH 542
            LS C R+Y  +  + EKAV  VLELEP    GY+LASSMYA+ GLW+++ARM+ L RE+ 
Sbjct: 646  LSAC-RTYR-SSTLGEKAVYQVLELEPLNLAGYLLASSMYASDGLWDNAARMKLLARERG 703

Query: 543  VNVVAGYSMVYVNNKRCRFVAGDRNQILSNEIQATVEGLHECMKMEK 683
            V  VAGYS+V+V++K  +FVAGD++   +  I   +  LH CMK+++
Sbjct: 704  VRAVAGYSIVHVDSKAHKFVAGDKSCSQAGNIHHMLNQLHFCMKIDQ 750


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