BLASTX nr result

ID: Atractylodes22_contig00032909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032909
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    61   1e-07
emb|CBI16098.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   1e-07
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]    60   1e-07
ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    57   1e-06

>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449527992|ref|XP_004170991.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 378

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = +2

Query: 107 TASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDS 214
           TASYWCYRC R VR   QD++ CPYC G F+EA+++
Sbjct: 5   TASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIET 40


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = +2

Query: 98  MSRTASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDS 214
           M+ T SYWC+RCTR VRV  QD++VCPYC+  F+E +++
Sbjct: 171 MASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEA 209


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = +2

Query: 98  MSRTASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDS 214
           M+ T SYWC+RCTR VRV  QD++VCPYC+  F+E +++
Sbjct: 3   MASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEA 41


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = +2

Query: 98  MSRTASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDS 214
           M+ T SYWC+RCTR VRV  QD++VCPYC+  F+E +++
Sbjct: 113 MASTTSYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEA 151


>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 393

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 29/41 (70%)
 Frame = +2

Query: 101 SRTASYWCYRCTRIVRVIPQDAVVCPYCQGEFIEAVDSHAP 223
           S T+SYWCYRC+R VRV P   VVCP C G FIE ++ H P
Sbjct: 5   SGTSSYWCYRCSRFVRVWPHHTVVCPDCDGGFIEEIE-HPP 44


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