BLASTX nr result

ID: Atractylodes22_contig00032888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032888
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302415.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13
emb|CBI19420.3| unnamed protein product [Vitis vinifera]               77   2e-12
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]    77   2e-12
ref|XP_002510115.1| transcription initiation factor, putative [R...    74   1e-11

>ref|XP_002302415.1| predicted protein [Populus trichocarpa] gi|222844141|gb|EEE81688.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +1

Query: 1   QPSIDVGPKPVSTSERNSKDNPDMERSSGAVTATPGPARKSLRNQDSPQSGKIPRTISVK 180
           QP  DV   P S S RN K+N + E+ S AV +  G  RK  RNQ      K+ RTI+VK
Sbjct: 288 QPVNDVNRNPQSPSGRNVKENLEAEKRSPAVPSASGAVRKFGRNQAIVPQTKVVRTITVK 347

Query: 181 DVISVLGREIQMSRSTLIYRLYEKVRSES 267
           DV++VL RE QMSRSTLIY+LYE++RS++
Sbjct: 348 DVMAVLEREPQMSRSTLIYQLYERIRSDA 376


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
            predicted protein [Populus trichocarpa]
          Length = 875

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1    QPSIDVGPKPVSTSERNSKDNPDMERSSGAV--TATPGPARKSLRNQDSPQSGKIPRTIS 174
            QP  DV  KP+S S RN  +N + E+ S  V  +A+    RK  RNQ      K+ RTIS
Sbjct: 782  QPVKDVNRKPLSPSGRNMMENLEAEKRSHVVPSSASGKSGRKCGRNQAIVPQTKVVRTIS 841

Query: 175  VKDVISVLGREIQMSRSTLIYRLYEKVRSES 267
            VKDV+SVL RE QMSRSTLIY+LYE++RS++
Sbjct: 842  VKDVMSVLEREPQMSRSTLIYQLYERIRSDA 872


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1    QPSIDVGPKPVSTSERNSKDNPDME-RSSGAVTATPGPARKSLRNQDSPQSGKIPRTISV 177
            QP  D   K  STS RN+++N + E R    V ++PG  RK  RN       ++ R I+V
Sbjct: 790  QPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNNAIVPQTRVARNITV 849

Query: 178  KDVISVLGREIQMSRSTLIYRLYEKVRS 261
            KDVISVL RE QM +STLIYRLYEK+RS
Sbjct: 850  KDVISVLEREPQMLKSTLIYRLYEKMRS 877


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 45/88 (51%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1    QPSIDVGPKPVSTSERNSKDNPDME-RSSGAVTATPGPARKSLRNQDSPQSGKIPRTISV 177
            QP  D   K  STS RN+++N + E R    V ++PG  RK  RN       ++ R I+V
Sbjct: 814  QPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNNAIVPQTRVARNITV 873

Query: 178  KDVISVLGREIQMSRSTLIYRLYEKVRS 261
            KDVISVL RE QM +STLIYRLYEK+RS
Sbjct: 874  KDVISVLEREPQMLKSTLIYRLYEKMRS 901


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
            gi|223550816|gb|EEF52302.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 925

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/85 (50%), Positives = 57/85 (67%)
 Frame = +1

Query: 13   DVGPKPVSTSERNSKDNPDMERSSGAVTATPGPARKSLRNQDSPQSGKIPRTISVKDVIS 192
            +V  KP  TS ++ KDN + E+ S A  +T    RK  RNQ      K+ R+ISVKDVI+
Sbjct: 840  EVTRKPQFTSGKSMKDNQEPEKRSPAAASTG--VRKVGRNQAFTPQSKVARSISVKDVIA 897

Query: 193  VLGREIQMSRSTLIYRLYEKVRSES 267
             L RE QMS+STLIYRLYE+V+S++
Sbjct: 898  ALEREPQMSKSTLIYRLYERVQSDA 922


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