BLASTX nr result

ID: Atractylodes22_contig00032883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032883
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    59   5e-07
emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]    51   1e-06
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      35   1e-06
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...    56   4e-06
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    55   5e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = -2

Query: 162  YGGHSGVHATTQRIARVLYWKELFKAHQTTLVFFTAYHPQSDGQTKVLNRCLE 4
            +G  S + +   RI   L+WKELF+ H TTL   +AYHPQ+DGQT+++NR LE
Sbjct: 1299 HGFPSSIVSDRDRIFLSLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNRALE 1351


>emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
          Length = 1258

 Score = 51.2 bits (121), Expect(2) = 1e-06
 Identities = 21/36 (58%), Positives = 29/36 (80%)
 Frame = -2

Query: 111  LYWKELFKAHQTTLVFFTAYHPQSDGQTKVLNRCLE 4
            L+W +LF+   T+L   TAYHPQ+DGQT+V+NRC+E
Sbjct: 1013 LFWTKLFRLLGTSLCHSTAYHPQTDGQTEVVNRCVE 1048



 Score = 26.2 bits (56), Expect(2) = 1e-06
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 272  HSKYALDEDCLSRKGKLVVGDEKELQLDLMNFIHASAMG 156
            + +Y+LD   L  KG+LV+     L   L+   HAS +G
Sbjct: 939  YPRYSLDHGVLLYKGRLVLPKASPLVPTLLQEGHASVVG 977


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 35.4 bits (80), Expect(3) = 1e-06
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = -3

Query: 272  HSKYALDEDCLSRKGKLVVGDEKELQLDLMNFIHASAMGAIRG 144
            H  Y+   + L RKGKLVVG++  ++L ++ ++H S  G   G
Sbjct: 1112 HPAYSFVNEELRRKGKLVVGNDAAVKLHILKWMHDSVSGGHSG 1154



 Score = 30.8 bits (68), Expect(3) = 1e-06
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 159  GGHSGVHATTQRIARVLYWKEL 94
            GGHSG  AT QRI  + YW ++
Sbjct: 1150 GGHSGRDATLQRIKALFYWSKM 1171



 Score = 30.0 bits (66), Expect(3) = 1e-06
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = -1

Query: 526  PTHQKRLSKLIRFQYTMQYVKGFENSGRCFVNKAXXXXXXXXXXXXXXFTGWKDKIKLSV 347
            P     LSKL+ + Y +QY +G EN     +++                 G  D I+L  
Sbjct: 1034 PFQHMWLSKLMGYTYEIQYKQGKENHAADALSRV-TGAQLLSITLSHAHEGLFDSIQLLW 1092

Query: 346  QTDGKLQGLIEVLKQNPS 293
            Q+D  L  +I  +K NP+
Sbjct: 1093 QSDPHLSKVISDIKSNPA 1110


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 24/53 (45%), Positives = 36/53 (67%)
 Frame = -2

Query: 162  YGGHSGVHATTQRIARVLYWKELFKAHQTTLVFFTAYHPQSDGQTKVLNRCLE 4
            +G    + +   R+    +WK+LF+A  T L + TA+HPQ+DGQT+VLNRC+E
Sbjct: 2400 HGFPRSIVSDRDRVFLSSFWKDLFRASGTKLKYSTAFHPQTDGQTEVLNRCME 2452


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/54 (50%), Positives = 36/54 (66%)
 Frame = -2

Query: 162  YGGHSGVHATTQRIARVLYWKELFKAHQTTLVFFTAYHPQSDGQTKVLNRCLEA 1
            +G  S + +   ++   L+WKELFK   T L   TAYHPQSDGQT+V+N+ LEA
Sbjct: 1232 HGFPSTIVSDRDKVFMSLFWKELFKLQGTLLHRSTAYHPQSDGQTEVVNKSLEA 1285


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