BLASTX nr result

ID: Atractylodes22_contig00032815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032815
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443358.1| hypothetical protein SORBIDRAFT_08g018180 [S...    59   4e-07
gb|ACF80884.1| unknown [Zea mays] gi|194705548|gb|ACF86858.1| un...    59   4e-07
ref|XP_003562412.1| PREDICTED: cytochrome c oxidase subunit 5C-l...    59   5e-07
gb|ABL97970.1| cytochrome-c oxidase [Brassica rapa]                    58   7e-07
sp|Q8VY39.1|CX5C2_HELAN RecName: Full=Cytochrome c oxidase subun...    58   7e-07

>ref|XP_002443358.1| hypothetical protein SORBIDRAFT_08g018180 [Sorghum bicolor]
           gi|241944051|gb|EES17196.1| hypothetical protein
           SORBIDRAFT_08g018180 [Sorghum bicolor]
          Length = 63

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = +1

Query: 190 VIKEIGVGTVLGFICGGAWKYIYHYELKRRTKSFYNMLDKDEITVVVSE 336
           V+KEI +G  LG I GG WK ++H+  +R+T+SFY+MLDK +I+VVV E
Sbjct: 16  VVKEIFIGMTLGLIAGGMWK-MHHWNEQRKTRSFYDMLDKGQISVVVEE 63


>gb|ACF80884.1| unknown [Zea mays] gi|194705548|gb|ACF86858.1| unknown [Zea mays]
           gi|195605218|gb|ACG24439.1| cytochrome c oxidase
           polypeptide Vc [Zea mays] gi|195608682|gb|ACG26171.1|
           cytochrome c oxidase polypeptide Vc [Zea mays]
           gi|195610044|gb|ACG26852.1| cytochrome c oxidase
           polypeptide Vc [Zea mays] gi|195618014|gb|ACG30837.1|
           cytochrome c oxidase polypeptide Vc [Zea mays]
           gi|195655785|gb|ACG47360.1| cytochrome c oxidase
           polypeptide Vc [Zea mays] gi|414868438|tpg|DAA46995.1|
           TPA: cytochrome c oxidase polypeptide Vc [Zea mays]
           gi|414878119|tpg|DAA55250.1| TPA: cytochrome c oxidase
           polypeptide Vc [Zea mays]
          Length = 63

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = +1

Query: 190 VIKEIGVGTVLGFICGGAWKYIYHYELKRRTKSFYNMLDKDEITVVVSE 336
           V+KEI +G  LG I GG WK ++H+  +R+T+SFY+MLDK +I+VVV E
Sbjct: 16  VVKEIFIGLTLGLIAGGMWK-MHHWNEQRKTRSFYDMLDKGQISVVVEE 63


>ref|XP_003562412.1| PREDICTED: cytochrome c oxidase subunit 5C-like [Brachypodium
           distachyon]
          Length = 66

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = +1

Query: 190 VIKEIGVGTVLGFICGGAWKYIYHYELKRRTKSFYNMLDKDEITVVVSE 336
           V+KEI +G  LG + GG WK ++H+  +R+T+SFY+MLDK +I+VVV E
Sbjct: 19  VVKEIFIGLTLGLVAGGMWK-MHHWNEQRKTRSFYDMLDKGQISVVVQE 66


>gb|ABL97970.1| cytochrome-c oxidase [Brassica rapa]
          Length = 63

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/49 (51%), Positives = 39/49 (79%)
 Frame = +1

Query: 190 VIKEIGVGTVLGFICGGAWKYIYHYELKRRTKSFYNMLDKDEITVVVSE 336
           V+KE+ +G  LG   GG WK ++H+  +R+T++FY++LDKDEI+VVV+E
Sbjct: 16  VVKELVIGLALGLAAGGLWK-MHHWNEQRKTRAFYDLLDKDEISVVVAE 63


>sp|Q8VY39.1|CX5C2_HELAN RecName: Full=Cytochrome c oxidase subunit 5C-2; AltName:
           Full=Cytochrome c oxidase polypeptide Vc-2
           gi|18409602|gb|AAL67939.1| cytochrome c oxidase subunit
           5c [Helianthus annuus]
          Length = 64

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +1

Query: 151 GKMVGAPPGTAKIVIKEIGVGTVLGFICGGAWKYIYHYELKRRTKSFYNMLDKDEITVVV 330
           G  V  P      V+KE+ +GTVLG   GG WK ++H+  +R+T++FY++L+K EI+VVV
Sbjct: 3   GGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWK-MHHWNEQRKTRAFYDLLEKGEISVVV 61

Query: 331 SE 336
            E
Sbjct: 62  DE 63


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