BLASTX nr result

ID: Atractylodes22_contig00032696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032696
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    65   6e-09
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    63   2e-08
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    60   2e-07
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    59   5e-07
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    59   5e-07

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 95   RGFRTLTRSEWEERRRKGLCYKCGQMFGPA-HKCPEGALRIMLLADDEGVSEEG 253
            +G R++   E  ERR KGLC+KCG  + P  HKCPE +LR+++L + EGV+EEG
Sbjct: 922  KGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEG 975


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +2

Query: 62  TDVGVSSQGHNRGFRTLTRSEWEERRRKGLCYKCGQMFGPA-HKCPEGALRIMLLADDEG 238
           T  GVS +   +G R++  +E  ERR KGLC+KCG  + P  HKCPE ALR+++L + E 
Sbjct: 288 TRTGVSEKW--KGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEA 345

Query: 239 VSEEG 253
           +++EG
Sbjct: 346 LNDEG 350


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 95  RGFRTLTRSEWEERRRKGLCYKCGQMFGPA-HKCPEGALRIMLLADDEGVSEEG 253
           +G R++   E+EERR KGLC+KCG  + P  HKC E ALR+++L + E +++EG
Sbjct: 313 KGIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEG 366


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = +2

Query: 131 ERRRKGLCYKCGQMFGPA-HKCPEGALRIMLLADDEGVSEEG 253
           ERR KGLC+KCG  + P  HKCPE +LR+++L + EGV+EEG
Sbjct: 3   ERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEG 44


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = +2

Query: 92  NRGFRTLTRSEWEERRRKGLCYKCGQMFGPAHKCPEGALRIMLLADDEGVSEEG 253
           +R F  L+ +E  ER++KGLC+KCG  F P H+CP+  LR+++L +DE    EG
Sbjct: 93  DRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEG 146


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