BLASTX nr result

ID: Atractylodes22_contig00032653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032653
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communi...   108   6e-22
ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...   105   7e-21
ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_004146976.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransf...    96   7e-18
gb|AAD25797.1|AC006550_5 Contains 2 PF|00400 WD40, G-beta repeat...    91   2e-16

>ref|XP_002524762.1| WD-repeat protein, putative [Ricinus communis]
           gi|223535946|gb|EEF37605.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 435

 Score =  108 bits (271), Expect = 6e-22
 Identities = 58/108 (53%), Positives = 75/108 (69%)
 Frame = -3

Query: 629 GEDFIPTSLGTSLTSDFLWMVMGVSNLPGFDSSSLARVRVISGLSKCNSASGNDNLNILE 450
           GE+FIPTSLG+S +++ +WMV GVS L G D +SLARVRV+SG +K    S +  L++L 
Sbjct: 312 GENFIPTSLGSSSSAELIWMVTGVSKLQGSDHNSLARVRVLSGFTKSIPDSTDGELHVLG 371

Query: 449 DKQVPCGEXXXXXXXXXXSIDKDVFSAAAEAVKTSMRNLLIKKQYSSE 306
           D +VP  E           ID+ VF AAAEAVKT+M NLLIKKQY++E
Sbjct: 372 DNEVPGAEKLLEKLQGSVFIDEKVFQAAAEAVKTAMCNLLIKKQYTTE 419


>ref|XP_003632308.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
           [Vitis vinifera] gi|296085216|emb|CBI28711.3| unnamed
           protein product [Vitis vinifera]
          Length = 433

 Score =  105 bits (262), Expect = 7e-21
 Identities = 60/108 (55%), Positives = 71/108 (65%)
 Frame = -3

Query: 629 GEDFIPTSLGTSLTSDFLWMVMGVSNLPGFDSSSLARVRVISGLSKCNSASGNDNLNILE 450
           G  FIPTSLGT+  ++FLWMV GVS L G DS SLARVRVISG    +  S      +LE
Sbjct: 310 GGSFIPTSLGTASCAEFLWMVTGVSTLHGLDSHSLARVRVISGFRISSPDSVEHEPTMLE 369

Query: 449 DKQVPCGEXXXXXXXXXXSIDKDVFSAAAEAVKTSMRNLLIKKQYSSE 306
           D ++P GE          SI+  VFSAAAEAVK +M NLLIKKQYS++
Sbjct: 370 DDEIPGGEKLLEKLQGSVSIENKVFSAAAEAVKMAMCNLLIKKQYSAD 417


>ref|XP_002307594.1| predicted protein [Populus trichocarpa] gi|222857043|gb|EEE94590.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  100 bits (249), Expect = 2e-19
 Identities = 53/108 (49%), Positives = 71/108 (65%)
 Frame = -3

Query: 629 GEDFIPTSLGTSLTSDFLWMVMGVSNLPGFDSSSLARVRVISGLSKCNSASGNDNLNILE 450
           G+ FIPTSLG S +++ LW + GVS L G D +SLA VRV+SG  K    +    L +L+
Sbjct: 317 GDSFIPTSLGCSSSAELLWTITGVSKLHGSDHNSLACVRVLSGFKKTIPDAAGPELTLLD 376

Query: 449 DKQVPCGEXXXXXXXXXXSIDKDVFSAAAEAVKTSMRNLLIKKQYSSE 306
           D +VP  E          +++++VF AAAEAVKTSM NLLIKKQY++E
Sbjct: 377 DNEVPGAEKLLEKLQGSVTVEEEVFLAAAEAVKTSMCNLLIKKQYTTE 424


>ref|XP_004146976.1| PREDICTED: tRNA (guanine-N(7)-)-methyltransferase subunit WDR4-like
           [Cucumis sativus]
          Length = 431

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 53/107 (49%), Positives = 71/107 (66%)
 Frame = -3

Query: 626 EDFIPTSLGTSLTSDFLWMVMGVSNLPGFDSSSLARVRVISGLSKCNSASGNDNLNILED 447
           E FIPTSL TS ++ +LWMV GVS+L     SSLA V+V+SG +K NS +  ++++++ED
Sbjct: 311 ETFIPTSLSTSCSTGYLWMVTGVSSLHNLGHSSLAHVKVMSGFNKDNSTA--NDVSVVED 368

Query: 446 KQVPCGEXXXXXXXXXXSIDKDVFSAAAEAVKTSMRNLLIKKQYSSE 306
             +P G           + D+ VF AAAEAVKT+M NLL KKQYS E
Sbjct: 369 DAIPGGTKLLEKLQGGITFDEKVFLAAAEAVKTAMSNLLTKKQYSIE 415


>gb|AAD25797.1|AC006550_5 Contains 2 PF|00400 WD40, G-beta repeats [Arabidopsis thaliana]
          Length = 309

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 51/108 (47%), Positives = 67/108 (62%)
 Frame = -3

Query: 629 GEDFIPTSLGTSLTSDFLWMVMGVSNLPGFDSSSLARVRVISGLSKCNSASGNDNLNILE 450
           GE FIPTS+  S +S  LWMV G SNLPG +    +RVRVIS L         ++ +ILE
Sbjct: 193 GESFIPTSIAVSASSRLLWMVSGASNLPGSNHPGFSRVRVISCLE-------TESSSILE 245

Query: 449 DKQVPCGEXXXXXXXXXXSIDKDVFSAAAEAVKTSMRNLLIKKQYSSE 306
           D+Q+P G           +I++ V SAAAEAV+ +M +LL+KKQYS E
Sbjct: 246 DEQIPGGTKLLEQLQGKVTIEESVMSAAAEAVRAAMSSLLMKKQYSEE 293


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