BLASTX nr result
ID: Atractylodes22_contig00032644
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00032644
(614 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arab... 127 2e-27
ref|XP_002876464.1| predicted protein [Arabidopsis lyrata subsp.... 127 2e-27
gb|AAC83464.1| eIF3c [Arabidopsis thaliana] 125 6e-27
ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [... 125 6e-27
ref|XP_002531588.1| conserved hypothetical protein [Ricinus comm... 124 2e-26
>ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arabidopsis lyrata subsp.
lyrata] gi|297323908|gb|EFH54329.1| hypothetical protein
ARALYDRAFT_486056 [Arabidopsis lyrata subsp. lyrata]
Length = 888
Score = 127 bits (318), Expect = 2e-27
Identities = 82/178 (46%), Positives = 93/178 (52%), Gaps = 8/178 (4%)
Frame = -1
Query: 614 QLSKMFDLSKYQTHCTVSKMMINDELHACWDQPTKCIVFHEVEHSRLQALAFQLTEKLTV 435
QL+KMFD+S+ Q H VSKMMIN+ELHA WDQPT+CIVFHEV+HSRLQ+LAFQLTEKL++
Sbjct: 721 QLAKMFDVSEPQVHSIVSKMMINEELHASWDQPTQCIVFHEVQHSRLQSLAFQLTEKLSI 780
Query: 434 LAESN-----XXXXXXXXXXXXXXXXXGQDYASVA--GGTKWQDDTXXXXXXXXXXXXXX 276
LAESN QDYA A GG WQD T
Sbjct: 781 LAESNERAMESRTGGGGLDLSSRRRDNNQDYAGAASGGGGYWQDKTNYGQGRQGNRSGYG 840
Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXYHDSAGRNYQG-RGSQMDGSTRMVSLNRGIR 105
AGR G RG QMDGS+RMVSLNRG+R
Sbjct: 841 GGRSSGQNGQWLGQNRGGGY-----------AGRVGSGNRGMQMDGSSRMVSLNRGVR 887
>ref|XP_002876464.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322302|gb|EFH52723.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 892
Score = 127 bits (318), Expect = 2e-27
Identities = 78/176 (44%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Frame = -1
Query: 614 QLSKMFDLSKYQTHCTVSKMMINDELHACWDQPTKCIVFHEVEHSRLQALAFQLTEKLTV 435
QL+KMFDLS+ Q H +SKMMIN+ELHA WDQPT+CI+FH+V+H+RLQ LAFQLTEKL V
Sbjct: 722 QLAKMFDLSENQVHSIMSKMMINEELHASWDQPTRCIIFHDVQHTRLQTLAFQLTEKLAV 781
Query: 434 LAESN-----XXXXXXXXXXXXXXXXXGQDYASVAGGTKWQDDTXXXXXXXXXXXXXXXX 270
LAESN Q+YA AGG KWQD+
Sbjct: 782 LAESNERAMEARTGGGGVDLSSRRRDNNQEYAGGAGGGKWQDNMSYNQGRQGYNGGARSG 841
Query: 269 XXXXXXXXXXXXXXXXXXXXXXXXXYHDSAGRNYQG-RGSQMDGSTRMVSLNRGIR 105
AGR G RG QMDG +RMVSLNRG+R
Sbjct: 842 YVGNRSSGHARDWSGQNRGSDGY------AGRGGTGNRGMQMDGMSRMVSLNRGVR 891
>gb|AAC83464.1| eIF3c [Arabidopsis thaliana]
Length = 900
Score = 125 bits (314), Expect = 6e-27
Identities = 81/178 (45%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Frame = -1
Query: 614 QLSKMFDLSKYQTHCTVSKMMINDELHACWDQPTKCIVFHEVEHSRLQALAFQLTEKLTV 435
QL+KMFD+S+ Q H VSKMMIN+ELHA WDQPT+CIVFHEV+HSRLQ+LAFQLTEKL++
Sbjct: 733 QLAKMFDVSEPQVHSIVSKMMINEELHASWDQPTRCIVFHEVQHSRLQSLAFQLTEKLSI 792
Query: 434 LAESN-----XXXXXXXXXXXXXXXXXGQDYASVA--GGTKWQDDTXXXXXXXXXXXXXX 276
LAESN QDYA A GG WQD
Sbjct: 793 LAESNERAMESRTGGGGLDLSSRRRDNNQDYAGAASGGGGYWQDKANYGQGRQGNRSGYG 852
Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXYHDSAGRNYQG-RGSQMDGSTRMVSLNRGIR 105
AGR G RG QMDGS+RMVSLNRG+R
Sbjct: 853 GGRSSGQNGQWSGQNRGGGY-----------AGRVGSGNRGMQMDGSSRMVSLNRGVR 899
>ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
gi|334186011|ref|NP_001190102.1| translation initiation
factor eIF-3 subunit 8 [Arabidopsis thaliana]
gi|23503063|sp|O49160.2|EIF3C_ARATH RecName:
Full=Eukaryotic translation initiation factor 3 subunit
C; Short=eIF3c; AltName: Full=Eukaryotic translation
initiation factor 3 subunit 8; AltName: Full=eIF3 p110;
AltName: Full=p105 gi|7572913|emb|CAB87414.1| PROBABLE
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 8
[Arabidopsis thaliana] gi|17381100|gb|AAL36362.1|
putative eukaryotic translation initiation factor 3
subunit 8 [Arabidopsis thaliana]
gi|25054977|gb|AAN71960.1| putative eukaryotic
translation initiation factor 3 subunit 8 [Arabidopsis
thaliana] gi|332645965|gb|AEE79486.1| translation
initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
gi|332645966|gb|AEE79487.1| translation initiation factor
eIF-3 subunit 8 [Arabidopsis thaliana]
Length = 900
Score = 125 bits (314), Expect = 6e-27
Identities = 81/178 (45%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Frame = -1
Query: 614 QLSKMFDLSKYQTHCTVSKMMINDELHACWDQPTKCIVFHEVEHSRLQALAFQLTEKLTV 435
QL+KMFD+S+ Q H VSKMMIN+ELHA WDQPT+CIVFHEV+HSRLQ+LAFQLTEKL++
Sbjct: 733 QLAKMFDVSEPQVHSIVSKMMINEELHASWDQPTRCIVFHEVQHSRLQSLAFQLTEKLSI 792
Query: 434 LAESN-----XXXXXXXXXXXXXXXXXGQDYASVA--GGTKWQDDTXXXXXXXXXXXXXX 276
LAESN QDYA A GG WQD
Sbjct: 793 LAESNERAMESRTGGGGLDLSSRRRDNNQDYAGAASGGGGYWQDKANYGQGRQGNRSGYG 852
Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXYHDSAGRNYQG-RGSQMDGSTRMVSLNRGIR 105
AGR G RG QMDGS+RMVSLNRG+R
Sbjct: 853 GGRSSGQNGQWSGQNRGGGY-----------AGRVGSGNRGMQMDGSSRMVSLNRGVR 899
>ref|XP_002531588.1| conserved hypothetical protein [Ricinus communis]
gi|223528784|gb|EEF30791.1| conserved hypothetical
protein [Ricinus communis]
Length = 293
Score = 124 bits (310), Expect = 2e-26
Identities = 81/188 (43%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Frame = -1
Query: 614 QLSKMFDLSKYQTHCTVSKMMINDELHACWDQPTKCIVFHEVEHSRLQALAFQLTEKLTV 435
QL+KMFDLS+ QTH VSKMMIN+ELHA WDQPT+CI+FH V+H+RLQ LAFQLTEKL+V
Sbjct: 105 QLTKMFDLSEAQTHSIVSKMMINEELHASWDQPTQCIIFHNVQHTRLQGLAFQLTEKLSV 164
Query: 434 LAESN---XXXXXXXXXXXXXXXXXGQDYASV-AGGTKWQDD---------TXXXXXXXX 294
LAESN QDYAS+ A G KWQD+ +
Sbjct: 165 LAESNERAIEARIGGGLDLPMRRKDSQDYASMAAAGGKWQDNMSFTQGRQGSGRSGYNVG 224
Query: 293 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYHDSAGRN-YQ----GRGSQMDGSTRM 129
+ +GR+ YQ RGSQMD S RM
Sbjct: 225 SGRPPSVGHATGGGYSRGTGQSRGGGYSRYQDGAYGGSGRSAYQTGSGARGSQMDASNRM 284
Query: 128 VSLNRGIR 105
V+LNRG+R
Sbjct: 285 VNLNRGVR 292