BLASTX nr result

ID: Atractylodes22_contig00032624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032624
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319214.1| predicted protein [Populus trichocarpa] gi|2...   293   2e-77
ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus co...   283   1e-74
ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   282   3e-74
emb|CBI26575.3| unnamed protein product [Vitis vinifera]              282   3e-74
tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea m...   260   1e-67

>ref|XP_002319214.1| predicted protein [Populus trichocarpa] gi|222857590|gb|EEE95137.1|
            predicted protein [Populus trichocarpa]
          Length = 692

 Score =  293 bits (749), Expect = 2e-77
 Identities = 141/215 (65%), Positives = 169/215 (78%), Gaps = 6/215 (2%)
 Frame = +1

Query: 7    YYTRNFDCGSNDI-ERIKRDAVIKYTEGVCWVMHYYYQGVCSWQWFYPYHYAPFASDFCG 183
            YY   F+  S D  + I+R AV KY EG+CWVM YYY+GVCSWQWFYPYHYAPFASDF G
Sbjct: 428  YYAEKFEAKSEDERDTIRRHAVFKYVEGICWVMRYYYEGVCSWQWFYPYHYAPFASDFYG 487

Query: 184  LDKLEVHFTLGQPFKPLDQLLAVMPAASAQALPLFYRELMTKASSPILDFYPKDAKVDKN 363
             D+LE+HFTLG+PFKP DQL+AV+PAASA ALPLFYR+LM  ASSPILDFYP D ++D N
Sbjct: 488  CDQLEIHFTLGEPFKPFDQLMAVLPAASAHALPLFYRKLMIDASSPILDFYPTDFELDNN 547

Query: 364  GKKHAWQGVCKLPFIEESRLISETLKVEHTLTDEEKQRNRLGRDRLFVHKWHSLA-KVIN 540
            GK+ +WQ +CKLPFIEESRL+SE  KVEHTLTDEE++RNRLG D L VH  H LA KVI+
Sbjct: 548  GKRFSWQAICKLPFIEESRLVSEITKVEHTLTDEERRRNRLGYDVLCVHVSHPLAVKVIS 607

Query: 541  ----DHPSHHPSSELQIKIKPELSGGMNGYLCISD 633
                   S  P++  ++KI P++SGGMNGY+ IS+
Sbjct: 608  LFECKDQSALPTANGKLKIDPKISGGMNGYIYISE 642


>ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 1545

 Score =  283 bits (725), Expect = 1e-74
 Identities = 133/210 (63%), Positives = 161/210 (76%), Gaps = 1/210 (0%)
 Frame = +1

Query: 7    YYTRNFDCGSNDI-ERIKRDAVIKYTEGVCWVMHYYYQGVCSWQWFYPYHYAPFASDFCG 183
            YY + F   + D  E I+RD VIKY EG+CWVM YYY+GVCSWQWFYPYHYAPFASDF G
Sbjct: 476  YYAKKFKAKTKDEQESIRRDVVIKYMEGLCWVMRYYYEGVCSWQWFYPYHYAPFASDFYG 535

Query: 184  LDKLEVHFTLGQPFKPLDQLLAVMPAASAQALPLFYRELMTKASSPILDFYPKDAKVDKN 363
            LD L++ FTLG PFKP+DQL+ V+PAASA ALP+ YR+LMT  SSPILDFYP D ++D N
Sbjct: 536  LDDLKIQFTLGVPFKPMDQLMGVLPAASAHALPMLYRKLMTDESSPILDFYPSDFELDMN 595

Query: 364  GKKHAWQGVCKLPFIEESRLISETLKVEHTLTDEEKQRNRLGRDRLFVHKWHSLAKVIND 543
            GK+  WQ +CKLPFI+ESRL+SE  KVEHTLTD+E++RN LG + LFVH  H LA +I  
Sbjct: 596  GKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDERRRNSLGSNFLFVHISHPLADMIIY 655

Query: 544  HPSHHPSSELQIKIKPELSGGMNGYLCISD 633
                +    + +KI PELSGGMNG++ ISD
Sbjct: 656  FFKQNRDPNVLLKIDPELSGGMNGFVYISD 685


>ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 834

 Score =  282 bits (722), Expect = 3e-74
 Identities = 133/217 (61%), Positives = 166/217 (76%), Gaps = 8/217 (3%)
 Frame = +1

Query: 7    YYTRNFDCGS-NDIERIKRDAVIKYTEGVCWVMHYYYQGVCSWQWFYPYHYAPFASDFCG 183
            +Y   F+  + +D ER++R AV+KY EG+CWVMHYYYQGVCSWQWFYPYHYAPFASD  G
Sbjct: 495  FYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFYPYHYAPFASDIYG 554

Query: 184  LDKLEVHFTLGQPFKPLDQLLAVMPAASAQALPLFYRELMTKASSPILDFYPKDAKVDKN 363
            LD+L++ FTLG+PFKP DQL+ V+PAASA ALPL+YR+LM   +SPILDFYP D ++D N
Sbjct: 555  LDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETSPILDFYPADFELDMN 614

Query: 364  GKKHAWQGVCKLPFIEESRLISETLKVEHTLTDEEKQRNRLGRDRLFVH-------KWHS 522
            GK++ WQ +CKLPFI+ESRL++E  KVE TLTD+EK RNRLG D LF+H       K  S
Sbjct: 615  GKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIHISDPLAVKIFS 674

Query: 523  LAKVINDHPSHHPSSELQIKIKPELSGGMNGYLCISD 633
              K   DHP   P ++++ KI P+ SGGMNGY+ ISD
Sbjct: 675  FYKRKKDHPK-LPMAKVKRKIDPKFSGGMNGYMYISD 710


>emb|CBI26575.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score =  282 bits (722), Expect = 3e-74
 Identities = 133/217 (61%), Positives = 166/217 (76%), Gaps = 8/217 (3%)
 Frame = +1

Query: 7    YYTRNFDCGS-NDIERIKRDAVIKYTEGVCWVMHYYYQGVCSWQWFYPYHYAPFASDFCG 183
            +Y   F+  + +D ER++R AV+KY EG+CWVMHYYYQGVCSWQWFYPYHYAPFASD  G
Sbjct: 476  FYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFYPYHYAPFASDIYG 535

Query: 184  LDKLEVHFTLGQPFKPLDQLLAVMPAASAQALPLFYRELMTKASSPILDFYPKDAKVDKN 363
            LD+L++ FTLG+PFKP DQL+ V+PAASA ALPL+YR+LM   +SPILDFYP D ++D N
Sbjct: 536  LDQLDIQFTLGKPFKPFDQLMGVLPAASAHALPLYYRKLMMDETSPILDFYPADFELDMN 595

Query: 364  GKKHAWQGVCKLPFIEESRLISETLKVEHTLTDEEKQRNRLGRDRLFVH-------KWHS 522
            GK++ WQ +CKLPFI+ESRL++E  KVE TLTD+EK RNRLG D LF+H       K  S
Sbjct: 596  GKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKEKLRNRLGMDALFIHISDPLAVKIFS 655

Query: 523  LAKVINDHPSHHPSSELQIKIKPELSGGMNGYLCISD 633
              K   DHP   P ++++ KI P+ SGGMNGY+ ISD
Sbjct: 656  FYKRKKDHPK-LPMAKVKRKIDPKFSGGMNGYMYISD 691


>tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
          Length = 1066

 Score =  260 bits (665), Expect = 1e-67
 Identities = 128/218 (58%), Positives = 155/218 (71%), Gaps = 9/218 (4%)
 Frame = +1

Query: 7    YYTRNFDCGSND-IERIKRDAVIKYTEGVCWVMHYYYQGVCSWQWFYPYHYAPFASDFCG 183
            YY   F   + + IE I+RD V+KYTEG+CWVMHYYY+GVCSWQWFYPYHYAPFASD  G
Sbjct: 547  YYEEKFGARTPEQIEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLSG 606

Query: 184  LDKLEVHFTLGQPFKPLDQLLAVMPAASAQALPLFYRELMTKASSPILDFYPKDAKVDKN 363
            L +L + F LG PFKP DQL+ V PAASA ALPL YR LMT  +SPI+DFYP D +VD N
Sbjct: 607  LGQLNIKFELGTPFKPFDQLMGVFPAASAHALPLQYRRLMTDPNSPIIDFYPTDFEVDMN 666

Query: 364  GKKHAWQGVCKLPFIEESRLISETLKVEHTLTDEEKQRNRLGRDRLFVHKWHSLAKVI-- 537
            GK+++WQG+ KLPFI+E RL++E  KVEHTLT EE +RN +  D LFV+  H L+  I  
Sbjct: 667  GKRYSWQGIAKLPFIDEDRLLAEIKKVEHTLTPEEARRNSIMCDMLFVNGSHPLSPYIYS 726

Query: 538  -NDHPSHHPS---SELQIKIKPELSGGMNGY--LCISD 633
             N    H P    +E++ K+ P  SGGMNGY  LC  D
Sbjct: 727  LNSKFGHLPDKRRNEIKEKLDPSASGGMNGYITLCSGD 764


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