BLASTX nr result

ID: Atractylodes22_contig00032605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032605
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519303.1| conserved hypothetical protein [Ricinus comm...   159   5e-45
ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II tra...   162   3e-44
ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II tra...   162   1e-43
emb|CAB80843.1| hypothetical protein [Arabidopsis thaliana]           155   2e-43
gb|AAO22731.1| unknown protein [Arabidopsis thaliana]                 155   2e-43

>ref|XP_002519303.1| conserved hypothetical protein [Ricinus communis]
           gi|223541618|gb|EEF43167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  159 bits (401), Expect(2) = 5e-45
 Identities = 89/135 (65%), Positives = 99/135 (73%)
 Frame = +1

Query: 310 MDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXXXXX 489
           MDIISQLQEQV+TIA++AFNT GTLQRDAPPVRLSPNY                      
Sbjct: 1   MDIISQLQEQVDTIASLAFNTIGTLQRDAPPVRLSPNYPEPPA----------------- 43

Query: 490 XXXXXXXXESPNNNISEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAE 669
                    +P  +I++QPKL+SA LVKAAKQFDALVAALPL+EGGEEAQLKRIAELQAE
Sbjct: 44  --------SNPAEDIADQPKLMSAALVKAAKQFDALVAALPLAEGGEEAQLKRIAELQAE 95

Query: 670 NDLVGQELQKQLEAA 714
           ND VGQELQ+QLEAA
Sbjct: 96  NDAVGQELQRQLEAA 110



 Score = 50.1 bits (118), Expect(2) = 5e-45
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +2

Query: 770 EKELKQVQELFNEAADNCLNLKKPD 844
           EKELKQVQELF++A DNCLNLKKPD
Sbjct: 111 EKELKQVQELFSQATDNCLNLKKPD 135


>ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  162 bits (410), Expect(2) = 3e-44
 Identities = 92/135 (68%), Positives = 98/135 (72%)
 Frame = +1

Query: 310 MDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXXXXX 489
           MDIISQLQEQVNTIAA+AFNTFGTLQRDAPPVRLSPNY                      
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPT------------- 47

Query: 490 XXXXXXXXESPNNNISEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAE 669
                      N  I+EQPKL+SA LVKAAKQFDALVAALPLS+GGEE QLKRIAELQAE
Sbjct: 48  ---------EDNATIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAE 98

Query: 670 NDLVGQELQKQLEAA 714
           ND+VGQELQKQL+AA
Sbjct: 99  NDVVGQELQKQLQAA 113



 Score = 44.3 bits (103), Expect(2) = 3e-44
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +2

Query: 770 EKELKQVQELFNEAADNCLNLKKPD 844
           EKEL QVQELF++ ADNCLNLKK D
Sbjct: 114 EKELVQVQELFSQVADNCLNLKKAD 138


>ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  162 bits (410), Expect(2) = 1e-43
 Identities = 92/135 (68%), Positives = 98/135 (72%)
 Frame = +1

Query: 310 MDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXXXXX 489
           MDIISQLQEQVNTIAA+AFNTFGTLQRDAPPVRLSPNY                      
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPT------------- 47

Query: 490 XXXXXXXXESPNNNISEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAE 669
                      N  I+EQPKL+SA LVKAAKQFDALVAALPLS+GGEE QLKRIAELQAE
Sbjct: 48  ---------EDNATIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAE 98

Query: 670 NDLVGQELQKQLEAA 714
           ND+VGQELQKQL+AA
Sbjct: 99  NDVVGQELQKQLQAA 113



 Score = 42.0 bits (97), Expect(2) = 1e-43
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 770 EKELKQVQELFNEAADNCLNLKKPD 844
           EKEL QVQELF++ ADNCLNL K D
Sbjct: 114 EKELVQVQELFSQVADNCLNLMKAD 138


>emb|CAB80843.1| hypothetical protein [Arabidopsis thaliana]
          Length = 381

 Score =  155 bits (391), Expect(2) = 2e-43
 Identities = 91/138 (65%), Positives = 93/138 (67%)
 Frame = +1

Query: 301 FKKMDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXX 480
           F KMDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNY                   
Sbjct: 240 FWKMDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATTTVTDDATP---- 295

Query: 481 XXXXXXXXXXXESPNNNISEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAEL 660
                              EQPK LSA LVKAAKQFDALVAALPLSEGGE AQLKRIAEL
Sbjct: 296 -----------------FPEQPKQLSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAEL 338

Query: 661 QAENDLVGQELQKQLEAA 714
           Q ENDLVGQELQKQLEAA
Sbjct: 339 QVENDLVGQELQKQLEAA 356



 Score = 48.9 bits (115), Expect(2) = 2e-43
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +2

Query: 770 EKELKQVQELFNEAADNCLNLKKPD 844
           EKELKQVQELF +AADNCLN+KKP+
Sbjct: 357 EKELKQVQELFGQAADNCLNMKKPE 381


>gb|AAO22731.1| unknown protein [Arabidopsis thaliana]
          Length = 162

 Score =  155 bits (391), Expect(2) = 2e-43
 Identities = 91/138 (65%), Positives = 93/138 (67%)
 Frame = +1

Query: 301 FKKMDIISQLQEQVNTIAAVAFNTFGTLQRDAPPVRLSPNYXXXXXXXXXXXXXXXXXXX 480
           F KMDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNY                   
Sbjct: 21  FWKMDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATTTVTDDATP---- 76

Query: 481 XXXXXXXXXXXESPNNNISEQPKLLSAELVKAAKQFDALVAALPLSEGGEEAQLKRIAEL 660
                              EQPK LSA LVKAAKQFDALVAALPLSEGGE AQLKRIAEL
Sbjct: 77  -----------------FPEQPKQLSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAEL 119

Query: 661 QAENDLVGQELQKQLEAA 714
           Q ENDLVGQELQKQLEAA
Sbjct: 120 QVENDLVGQELQKQLEAA 137



 Score = 48.9 bits (115), Expect(2) = 2e-43
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +2

Query: 770 EKELKQVQELFNEAADNCLNLKKPD 844
           EKELKQVQELF +AADNCLN+KKP+
Sbjct: 138 EKELKQVQELFGQAADNCLNMKKPE 162


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