BLASTX nr result

ID: Atractylodes22_contig00032579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032579
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   129   7e-28
ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   129   1e-27
ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   127   2e-27
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...   126   6e-27
ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   124   3e-26

>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  129 bits (325), Expect = 7e-28
 Identities = 75/174 (43%), Positives = 96/174 (55%), Gaps = 3/174 (1%)
 Frame = -2

Query: 822 MSVPQPPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXLKRRAYAXXXXXXX 643
           M +PQ P+   H Y  ALQ+++YQA                     LKRRA +       
Sbjct: 1   MGLPQTPTPT-HLYPEALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRA-STSSSTAP 58

Query: 642 XXXXTFNYATSFLPLPHVTXXXXXXXXXLPKVVFDEDLKAKDSVCCVCLGEFEMNEELIQ 463
               + N A SFL               LP ++FD++LKA+DS+CCVCLGEFE+ EEL Q
Sbjct: 59  ILPSSMNQAASFLSPSCEIGLKGELKGKLPTILFDDELKARDSLCCVCLGEFEIKEELHQ 118

Query: 462 VPSCKHVFHKDCIHHWLQSNSTCPLCRCCVF---LAVGPISGPPPLQPNIQEAH 310
           VPSCKHVFH DCI+HWL++NSTCPLCRC VF    A  P+S      P+ Q ++
Sbjct: 119 VPSCKHVFHADCIYHWLRTNSTCPLCRCSVFPNTKAGNPVSPVRSEHPDNQNSN 172


>ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 214

 Score =  129 bits (323), Expect = 1e-27
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
 Frame = -2

Query: 822 MSVPQ----PPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXLKRRAYAXXX 655
           MS+PQ    PP    H Y   LQ+++YQ                      LKRRA +   
Sbjct: 1   MSLPQTATSPPP---HLYPQELQLKLYQTFIFSIPILFSIILFLLFYLFYLKRRASSLSS 57

Query: 654 XXXXXXXXTFNYAT--SFLPLPHVTXXXXXXXXXLPKVVFDEDLKAKDSVCCVCLGEFEM 481
                     N  T  S +P P            LP+++FDEDL A+DS+CCVCLGEFE+
Sbjct: 58  TPHLLPRTIANPPTTSSHIPQPCRLDLTLHFLDKLPRILFDEDLLARDSLCCVCLGEFEL 117

Query: 480 NEELIQVPSCKHVFHKDCIHHWLQSNSTCPLCRCCVFLAVGPISGPPPLQPNIQEAHLSG 301
            EEL+Q+P CKHVFH +CIHHWLQSNSTCPLCRC +      ++  PP+  NI    +S 
Sbjct: 118 KEELVQIPYCKHVFHLECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPI--NI----IST 171

Query: 300 DGPATEG 280
           D P   G
Sbjct: 172 DPPQQHG 178


>ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 206

 Score =  127 bits (320), Expect = 2e-27
 Identities = 69/166 (41%), Positives = 90/166 (54%), Gaps = 3/166 (1%)
 Frame = -2

Query: 822 MSVPQPPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXLKRRAYAXXXXXXX 643
           M VPQPP  + H Y   +Q+++YQA                     LKRRA +       
Sbjct: 1   MGVPQPPPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLH 60

Query: 642 XXXXTFNYATSFLPLPHVTXXXXXXXXXL---PKVVFDEDLKAKDSVCCVCLGEFEMNEE 472
               T N  T++ P P            L   P+++FDEDL+  DSVCCVCLGEFE+ EE
Sbjct: 61  ILPSTTNSQTTY-PYPSQPCRLDLAVQFLDKLPRILFDEDLRTGDSVCCVCLGEFELKEE 119

Query: 471 LIQVPSCKHVFHKDCIHHWLQSNSTCPLCRCCVFLAVGPISGPPPL 334
           L+Q+P CKHVFH  CI +WLQSNSTCPLCRC +  +   ++  PP+
Sbjct: 120 LLQIPYCKHVFHISCISNWLQSNSTCPLCRCSIIPSTKFLNPAPPI 165


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score =  126 bits (317), Expect = 6e-27
 Identities = 73/172 (42%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
 Frame = -2

Query: 822 MSVPQPPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXLKRRAYAXXXXXXX 643
           M  P   S N H Y  ALQ+++YQA                     LKRRA +       
Sbjct: 1   MGFPPTSSPNAHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATSLSSPSQV 60

Query: 642 XXXXTFNYATSFLPLPHVTXXXXXXXXXLPKVVFDEDLKAKDSVCCVCLGEFEMNEELIQ 463
               + N A   LP              LP V+FDEDLK ++S CCVCLGEFEM EEL+Q
Sbjct: 61  LPTSS-NQAAQQLPSVCQIGLKKEIKDKLPIVLFDEDLKTRESQCCVCLGEFEMKEELLQ 119

Query: 462 VPSCKHVFHKDCIHHWLQSNSTCPLCRCCVFLAV----------GPISGPPP 337
           +PSCKHVFH +CIHHWL SN+TCPLCR  V +            GP + PPP
Sbjct: 120 IPSCKHVFHIECIHHWLHSNTTCPLCRSFVIIPTTKLDNQDQSGGPDTSPPP 171


>ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 209

 Score =  124 bits (311), Expect = 3e-26
 Identities = 67/166 (40%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
 Frame = -2

Query: 822 MSVPQPPSINYHPYSHALQIRVYQAXXXXXXXXXXXXXXXXXXXXXLKRRAYAXXXXXXX 643
           M VPQPP  + H Y   +Q+++YQA                     LKRRA +       
Sbjct: 1   MGVPQPPPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLH 60

Query: 642 XXXXTFNYATSFLPL---PHVTXXXXXXXXXLPKVVFDEDLKAKDSVCCVCLGEFEMNEE 472
               T     +  P    P            LP+++FDEDL+ +DSVCCVCLGEFE+NEE
Sbjct: 61  ILPSTSTDPQTAYPYSTQPCRLDLTVQFLDKLPRILFDEDLRTRDSVCCVCLGEFELNEE 120

Query: 471 LIQVPSCKHVFHKDCIHHWLQSNSTCPLCRCCVFLAVGPISGPPPL 334
           L+Q+P C HVFH  CI +WLQSNSTCPLCRC +  +   ++  PP+
Sbjct: 121 LLQIPYCNHVFHISCICNWLQSNSTCPLCRCSIIPSSKFLNPAPPI 166


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