BLASTX nr result

ID: Atractylodes22_contig00032573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032573
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                69   2e-13
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    69   2e-13
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma...    61   2e-11
dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   2e-11
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    59   5e-11

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 69.3 bits (168), Expect(2) = 2e-13
 Identities = 31/60 (51%), Positives = 41/60 (68%)
 Frame = -3

Query: 185 VVWVSECWPVNKAHERKLEVAKMRMLRWISGRTLLDRILNRVFRAKLRVVPIKDKLREGR 6
           +++ +ECWPV  AH  K+ VA+MRMLRW+ G T  D+I N V R K+ V  + DKLRE R
Sbjct: 562 LLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREAR 621



 Score = 31.2 bits (69), Expect(2) = 2e-13
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -1

Query: 241 RVE*KLMGKFYRMAI*PTLLYGSQ 170
           ++  KL GKFYR+ + P LLYG++
Sbjct: 544 KISPKLKGKFYRVVVRPALLYGAE 567


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 69.3 bits (168), Expect(2) = 2e-13
 Identities = 31/60 (51%), Positives = 41/60 (68%)
 Frame = -3

Query: 185 VVWVSECWPVNKAHERKLEVAKMRMLRWISGRTLLDRILNRVFRAKLRVVPIKDKLREGR 6
           +++ +ECWPV  AH  K+ VA+MRMLRW+ G T  D+I N V R K+ V  + DKLRE R
Sbjct: 94  LLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREAR 153



 Score = 30.8 bits (68), Expect(2) = 2e-13
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -1

Query: 229 KLMGKFYRMAI*PTLLYGSQ 170
           KL GKFYR+ + P LLYG++
Sbjct: 80  KLKGKFYRVVVRPALLYGAE 99


>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
           gi|238014750|gb|ACR38410.1| unknown [Zea mays]
          Length = 215

 Score = 60.8 bits (146), Expect(2) = 2e-11
 Identities = 27/60 (45%), Positives = 41/60 (68%)
 Frame = -3

Query: 185 VVWVSECWPVNKAHERKLEVAKMRMLRWISGRTLLDRILNRVFRAKLRVVPIKDKLREGR 6
           +++ +ECWP  + H ++L VA+MRMLRWI G T  DR+ N   R ++ V PI++KL + R
Sbjct: 85  MLYGAECWPTKRRHVQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLMQHR 144



 Score = 32.7 bits (73), Expect(2) = 2e-11
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -1

Query: 241 RVE*KLMGKFYRMAI*PTLLYGSQ 170
           RV  KL GKFYR AI P +LYG++
Sbjct: 67  RVPHKLKGKFYRTAIRPAMLYGAE 90


>dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score = 62.4 bits (150), Expect(2) = 2e-11
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = -3

Query: 185 VVWVSECWPVNKAHERKLEVAKMRMLRWISGRTLLDRILNRVFRAKLRVVPIKDKLREGR 6
           +++ +ECWP  + H ++L VA+MRMLRWI G T  DR+ N   R +L V PI++KL + R
Sbjct: 106 ILYGAECWPTKRRHIQQLGVAEMRMLRWICGHTRKDRVRNDDIRERLGVAPIEEKLVQHR 165



 Score = 30.8 bits (68), Expect(2) = 2e-11
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -1

Query: 241 RVE*KLMGKFYRMAI*PTLLYGSQ 170
           RV  KL G+FYR AI P +LYG++
Sbjct: 88  RVLQKLKGRFYRTAIRPAILYGAE 111


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 59.3 bits (142), Expect(2) = 5e-11
 Identities = 26/60 (43%), Positives = 40/60 (66%)
 Frame = -3

Query: 185 VVWVSECWPVNKAHERKLEVAKMRMLRWISGRTLLDRILNRVFRAKLRVVPIKDKLREGR 6
           +++ +ECWP  + H ++L VA+MRMLRW+ G T  DR+ N   R ++ V PI +KL + R
Sbjct: 437 ILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRVRNDDIRDRVGVAPIAEKLVQHR 496



 Score = 32.7 bits (73), Expect(2) = 5e-11
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -1

Query: 241 RVE*KLMGKFYRMAI*PTLLYGSQ 170
           RV  KL GKFYR AI P +LYG++
Sbjct: 419 RVPQKLKGKFYRTAIRPAILYGAE 442


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