BLASTX nr result

ID: Atractylodes22_contig00032565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032565
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   132   3e-29
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   130   8e-29
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   128   4e-28
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...   115   3e-24
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    83   2e-14

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/135 (42%), Positives = 90/135 (66%)
 Frame = -3

Query: 408 GYDPKGWIAKAELYFNIHSTPSPLRLHFAQLSMTGVAQHWFTIVKEIHVDLTWEQFTSEL 229
           G DP  WI +AE+YF++  T   +R+  A+LSM G   HWF ++ E   +L+WE     L
Sbjct: 81  GDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWENLKRAL 140

Query: 228 LQRFSGLELQNPYEQLSTIQQVGSILDYIDDFEYLLSLVPRLPESQSLGYFLAGLRPAVK 49
           + R+ G  L+NP+E+LST++Q GS+ ++++ FE L S V RLPE Q LGYF++GL+P ++
Sbjct: 141 IARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIR 200

Query: 48  KWVRLHRPESRLQAM 4
           + VR   P +R++ M
Sbjct: 201 RRVRTLNPRNRMEMM 215


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/135 (42%), Positives = 92/135 (68%)
 Frame = -3

Query: 408  GYDPKGWIAKAELYFNIHSTPSPLRLHFAQLSMTGVAQHWFTIVKEIHVDLTWEQFTSEL 229
            G DP  WI +AE+YF++ +TP  +R+  ++LSM G   HWF ++ E   DL+ E+    L
Sbjct: 754  GDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKKAL 813

Query: 228  LQRFSGLELQNPYEQLSTIQQVGSILDYIDDFEYLLSLVPRLPESQSLGYFLAGLRPAVK 49
            + R+ G  L+NP+E+LST++Q+GS+ ++++ FE L S V RLPE Q LGYF++GL+  ++
Sbjct: 814  IARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKAHIR 873

Query: 48   KWVRLHRPESRLQAM 4
            + VR   P +R+Q M
Sbjct: 874  RRVRTLNPTTRMQMM 888


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  128 bits (322), Expect = 4e-28
 Identities = 58/135 (42%), Positives = 90/135 (66%)
 Frame = -3

Query: 408 GYDPKGWIAKAELYFNIHSTPSPLRLHFAQLSMTGVAQHWFTIVKEIHVDLTWEQFTSEL 229
           G D   WI + E+YF++ +T   +R+  A+LSM G   HWF ++ E   +L+WE+    L
Sbjct: 64  GDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRAL 123

Query: 228 LQRFSGLELQNPYEQLSTIQQVGSILDYIDDFEYLLSLVPRLPESQSLGYFLAGLRPAVK 49
           + R+ G  L+NP+E+LSTI+Q GS+ ++++ FE L S V RLPE Q LGYF++GL+P ++
Sbjct: 124 IARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIR 183

Query: 48  KWVRLHRPESRLQAM 4
           + VR   P +R+Q M
Sbjct: 184 RRVRTLNPLNRMQMM 198


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/124 (45%), Positives = 82/124 (66%)
 Frame = -3

Query: 408 GYDPKGWIAKAELYFNIHSTPSPLRLHFAQLSMTGVAQHWFTIVKEIHVDLTWEQFTSEL 229
           G DP GWIA+AE+YFN+ +T   ++++ AQL M G   H+F  + E +  LTWE     L
Sbjct: 91  GDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKDAL 150

Query: 228 LQRFSGLELQNPYEQLSTIQQVGSILDYIDDFEYLLSLVPRLPESQSLGYFLAGLRPAVK 49
           L+R+ G+   N +EQLS +QQ G+I +YI DFE L++ +P+LP  Q LGYF+ GL+  ++
Sbjct: 151 LERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHGLKDKIR 210

Query: 48  KWVR 37
             VR
Sbjct: 211 GKVR 214


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
 Frame = -3

Query: 402 DPKGWIAKAELYFNIHSTPSPLRLHFAQLSMTGVAQHWFTIVK----EIHVDLTWEQFTS 235
           DP  W+ K + +F+   TP   ++ +A   +   A  W+   K    E   ++TWE F  
Sbjct: 94  DPTMWLTKVKQFFDYQETPGTQKVQYAAYHLEDEANEWWQATKRAYAEEEAEITWEVFEE 153

Query: 234 ELLQRFSGLELQNPYEQLSTIQQVGSILDYIDDFEYLLSLVPRLPESQSLGYFLAGLRPA 55
           EL  RF   E ++  E LS I+Q G+  DY  +FE L++ V    +   +G F+ GL P+
Sbjct: 154 ELWARFGSTECEDFDEALSKIKQAGTFRDYQREFERLVNKVQGWTQKALVGTFMGGLHPS 213

Query: 54  VKKWVRLHRPESRLQAM 4
           +   +R+ RP+S  +A+
Sbjct: 214 IADGIRMFRPKSLKEAI 230


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