BLASTX nr result

ID: Atractylodes22_contig00032526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032526
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   138   5e-31
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   135   3e-30
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   135   3e-30
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   135   3e-30

>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  140 bits (354), Expect = 8e-32
 Identities = 72/97 (74%), Positives = 78/97 (80%)
 Frame = +1

Query: 1    SEYEQLPARPGEEELICRLIHHQRFSFENPKYADPHVKANVLLQAHFSRQMVGGNLGSDQ 180
            SEY QLP RPGEEE++ RLI+HQRFSFENP+YADPHVKANVLLQAHFSRQ VGGNL  DQ
Sbjct: 1864 SEYAQLPIRPGEEEVLRRLINHQRFSFENPRYADPHVKANVLLQAHFSRQSVGGNLALDQ 1923

Query: 181  QEVILSASRLLQAMVDVIXXXXXXXXXXXXMEVSQMV 291
            +EV+LS SRLLQAMVDVI            MEVSQMV
Sbjct: 1924 REVLLSGSRLLQAMVDVISSNGWLSLALLAMEVSQMV 1960


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score =  138 bits (347), Expect = 5e-31
 Identities = 70/97 (72%), Positives = 78/97 (80%)
 Frame = +1

Query: 1    SEYEQLPARPGEEELICRLIHHQRFSFENPKYADPHVKANVLLQAHFSRQMVGGNLGSDQ 180
            SEY QLP RPGEEE++ RLI+HQRFSFENP+Y+DPHVKANVLLQAHFSR  VGGNL  DQ
Sbjct: 1520 SEYAQLPIRPGEEEVLRRLINHQRFSFENPRYSDPHVKANVLLQAHFSRHSVGGNLALDQ 1579

Query: 181  QEVILSASRLLQAMVDVIXXXXXXXXXXXXMEVSQMV 291
            +EV+LS+SRLLQAMVDVI            MEVSQMV
Sbjct: 1580 REVLLSSSRLLQAMVDVISSNGWLSLALLAMEVSQMV 1616


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/97 (71%), Positives = 76/97 (78%)
 Frame = +1

Query: 1    SEYEQLPARPGEEELICRLIHHQRFSFENPKYADPHVKANVLLQAHFSRQMVGGNLGSDQ 180
            SEY QLP RPGEEE++ +LI+HQRFSFENPK  DPHVKAN LLQAHFSRQ VGGNL  DQ
Sbjct: 1891 SEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFSRQFVGGNLALDQ 1950

Query: 181  QEVILSASRLLQAMVDVIXXXXXXXXXXXXMEVSQMV 291
            +EV+LSA+RLLQAMVDVI            MEVSQMV
Sbjct: 1951 KEVLLSANRLLQAMVDVISSNGWLSLALLAMEVSQMV 1987


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/97 (71%), Positives = 76/97 (78%)
 Frame = +1

Query: 1    SEYEQLPARPGEEELICRLIHHQRFSFENPKYADPHVKANVLLQAHFSRQMVGGNLGSDQ 180
            SEY Q+P RPGEE+LI RLI+HQRFSFENPK  DPH+KAN LLQAHFSRQ+VGGNL  DQ
Sbjct: 1887 SEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSRQIVGGNLALDQ 1946

Query: 181  QEVILSASRLLQAMVDVIXXXXXXXXXXXXMEVSQMV 291
            +EV+LSA RLLQAMVDVI            MEVSQMV
Sbjct: 1947 REVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMV 1983


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/97 (71%), Positives = 76/97 (78%)
 Frame = +1

Query: 1    SEYEQLPARPGEEELICRLIHHQRFSFENPKYADPHVKANVLLQAHFSRQMVGGNLGSDQ 180
            SEY Q+P RPGEE+LI RLI+HQRFSFENPK  DPH+KAN LLQAHFSRQ+VGGNL  DQ
Sbjct: 1854 SEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSRQIVGGNLALDQ 1913

Query: 181  QEVILSASRLLQAMVDVIXXXXXXXXXXXXMEVSQMV 291
            +EV+LSA RLLQAMVDVI            MEVSQMV
Sbjct: 1914 REVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMV 1950


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