BLASTX nr result

ID: Atractylodes22_contig00032500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032500
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83231.1| hypothetical protein VITISV_018480 [Vitis vinifera]    80   2e-13
ref|XP_002881966.1| protein binding protein [Arabidopsis lyrata ...    79   4e-13
gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi]         79   5e-13
ref|XP_002326884.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|NP_001078058.1| RING/U-box domain-containing protein [Arabid...    77   1e-12

>emb|CAN83231.1| hypothetical protein VITISV_018480 [Vitis vinifera]
          Length = 357

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/70 (51%), Positives = 42/70 (60%)
 Frame = +2

Query: 263 RRFHVIVLKPCAGKKGGIETKAVFCAVCLYDVAGGERYRKLPQCHHCFHVECIDPWFELK 442
           +R HV   KP            ++C VCL D   GER R+LP C HCFHV CID WF+  
Sbjct: 45  KRDHVFCYKP------NRTHXZIYCVVCLCDAVEGERLRRLPDCKHCFHVGCIDAWFQAH 98

Query: 443 SSCPLCRSQV 472
           S+CPLCRSQV
Sbjct: 99  STCPLCRSQV 108


>ref|XP_002881966.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327805|gb|EFH58225.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = +2

Query: 332 FCAVCLYDVAGGERYRKLPQCHHCFHVECIDPWFELKSSCPLCRSQVP 475
           +C +CL D A GE+ R++  C+HCFH +CIDPW E KS+CPLCR+++P
Sbjct: 69  YCTICLEDAAEGEKMRRITTCNHCFHADCIDPWLEKKSTCPLCRAEIP 116


>gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi]
          Length = 308

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = +2

Query: 299 GKKGGIETKAVFCAVCLYDVAGGERYRKLPQCHHCFHVECIDPWFELKSSCPLCRSQV 472
           GK G ++  A+ CAVCL +VA GE+ R LP+C H FHVECID WF    +CPLCR+ V
Sbjct: 90  GKDGAVDVDALECAVCLSEVADGEKVRTLPKCGHGFHVECIDMWFHSHDTCPLCRAPV 147


>ref|XP_002326884.1| predicted protein [Populus trichocarpa] gi|222835199|gb|EEE73634.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = +2

Query: 332 FCAVCLYDVAGGERYRKLPQCHHCFHVECIDPWFELKSSCPLCRSQV 472
           +C VCL++V  GER RKL +C HCFHV CID WF+  S+CPLCR+QV
Sbjct: 70  YCVVCLHEVVDGERLRKLLKCKHCFHVACIDAWFQSHSTCPLCRNQV 116


>ref|NP_001078058.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|330255347|gb|AEC10441.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 145

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = +2

Query: 332 FCAVCLYDVAGGERYRKLPQCHHCFHVECIDPWFELKSSCPLCRSQVP 475
           +C +CL D A GE+ R++  C HCFHV+CIDPW   KS+CPLCR+++P
Sbjct: 69  YCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIP 116


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