BLASTX nr result
ID: Atractylodes22_contig00032498
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00032498
(919 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299368.1| predicted protein [Populus trichocarpa] gi|2... 97 9e-29
ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putati... 98 1e-28
ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|2... 96 4e-28
ref|XP_004140564.1| PREDICTED: U2 small nuclear ribonucleoprotei... 99 1e-26
ref|XP_004157628.1| PREDICTED: U2 small nuclear ribonucleoprotei... 99 4e-25
>ref|XP_002299368.1| predicted protein [Populus trichocarpa] gi|222846626|gb|EEE84173.1|
predicted protein [Populus trichocarpa]
Length = 284
Score = 97.1 bits (240), Expect(3) = 9e-29
Identities = 52/81 (64%), Positives = 54/81 (66%)
Frame = +3
Query: 3 NLAEIDPLASLTKLQYLSLLDNNIIKKPNYRLYVIHKLKALRVLDFKKVKQKERIXXXXX 182
NLAEIDPLASL KL +LSLLDNNI KKPNYRLYVIHKLK+LRVLDFKKVK KER
Sbjct: 102 NLAEIDPLASLPKLHFLSLLDNNITKKPNYRLYVIHKLKSLRVLDFKKVKGKERAEAEHL 161
Query: 183 XXXXXXXXXXXXXXXXTFVPG 245
TF PG
Sbjct: 162 FASKEVEEEARRESVKTFTPG 182
Score = 46.6 bits (109), Expect(3) = 9e-29
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +2
Query: 344 E*ALKSGQVPADLNIWDASKTINNEGSIDNMATDRENEAATDGSKDASTEQKNDVPTDME 523
E AL SGQ+PADL I D + + + + D MATD +NEA + + EQK++ T ME
Sbjct: 227 EKALNSGQLPADLKILDGTGSNSVKEQDDKMATDNQNEAEPNNLE----EQKDNEATPME 282
Query: 524 QE 529
QE
Sbjct: 283 QE 284
Score = 30.4 bits (67), Expect(3) = 9e-29
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 244 AAIVNSQTLEEVARL 288
AAIVNSQTLEEVARL
Sbjct: 212 AAIVNSQTLEEVARL 226
>ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putative [Ricinus communis]
gi|223548673|gb|EEF50164.1| U2 small nuclear
ribonucleoprotein A, putative [Ricinus communis]
Length = 287
Score = 97.8 bits (242), Expect(3) = 1e-28
Identities = 50/81 (61%), Positives = 56/81 (69%)
Frame = +3
Query: 3 NLAEIDPLASLTKLQYLSLLDNNIIKKPNYRLYVIHKLKALRVLDFKKVKQKERIXXXXX 182
NL EIDPLASL KLQ+LSLLDN+I KKPNYRLY+IHKLK+LRVLDFKKVK KER+
Sbjct: 102 NLVEIDPLASLPKLQFLSLLDNSITKKPNYRLYIIHKLKSLRVLDFKKVKSKERMEAENL 161
Query: 183 XXXXXXXXXXXXXXXXTFVPG 245
TF+PG
Sbjct: 162 FASKEVEEEAIRESAKTFIPG 182
Score = 45.4 bits (106), Expect(3) = 1e-28
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 344 E*ALKSGQVPADLNIWDASKTINN-EGSIDNMATDRENEAATDGSKDASTEQKNDVPTDM 520
E AL SGQ+P DLNI+D +N + D MATD +N+ TD EQK+ M
Sbjct: 227 EKALNSGQIPTDLNIFDNDSELNTVQEKDDKMATDGDNK--TDHEPSNLDEQKDSDSASM 284
Query: 521 EQE 529
EQE
Sbjct: 285 EQE 287
Score = 30.4 bits (67), Expect(3) = 1e-28
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 244 AAIVNSQTLEEVARL 288
AAIVNSQTLEEVARL
Sbjct: 212 AAIVNSQTLEEVARL 226
>ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|222841164|gb|EEE78711.1|
predicted protein [Populus trichocarpa]
Length = 284
Score = 95.9 bits (237), Expect(3) = 4e-28
Identities = 51/81 (62%), Positives = 54/81 (66%)
Frame = +3
Query: 3 NLAEIDPLASLTKLQYLSLLDNNIIKKPNYRLYVIHKLKALRVLDFKKVKQKERIXXXXX 182
NLAEIDPL+SL KLQ+LSLLDN I KKPNYRLYVIHKLK+LRVLDFKKVK KER
Sbjct: 102 NLAEIDPLSSLPKLQFLSLLDNTITKKPNYRLYVIHKLKSLRVLDFKKVKAKERAEAEHL 161
Query: 183 XXXXXXXXXXXXXXXXTFVPG 245
TF PG
Sbjct: 162 FSSKEVEEEAKRESVKTFTPG 182
Score = 45.4 bits (106), Expect(3) = 4e-28
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +2
Query: 344 E*ALKSGQVPADLNIWDASKTINNEGSIDNMATDRENEAATDGSKDASTEQKNDVPTDME 523
E AL SGQ+PADL I D + + + + D MATD +NEA + + EQK++ T ME
Sbjct: 227 EKALNSGQLPADLKILDDTGSNSVKEQDDKMATDSQNEAEPNNLE----EQKDNEATPME 282
Query: 524 QE 529
QE
Sbjct: 283 QE 284
Score = 30.4 bits (67), Expect(3) = 4e-28
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 244 AAIVNSQTLEEVARL 288
AAIVNSQTLEEVARL
Sbjct: 212 AAIVNSQTLEEVARL 226
>ref|XP_004140564.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Cucumis
sativus]
Length = 279
Score = 99.4 bits (246), Expect(3) = 1e-26
Identities = 51/81 (62%), Positives = 57/81 (70%)
Frame = +3
Query: 3 NLAEIDPLASLTKLQYLSLLDNNIIKKPNYRLYVIHKLKALRVLDFKKVKQKERIXXXXX 182
NL EIDPLASL+KLQ+LSLLDNNI KKPNYRLYVIHKLK++RVLDFKKV+ KER+
Sbjct: 102 NLVEIDPLASLSKLQFLSLLDNNITKKPNYRLYVIHKLKSVRVLDFKKVRNKERLEARNL 161
Query: 183 XXXXXXXXXXXXXXXXTFVPG 245
TFVPG
Sbjct: 162 FSSKEVEEEAKKESVKTFVPG 182
Score = 37.4 bits (85), Expect(3) = 1e-26
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 344 E*ALKSGQVPADLNIWDASKTINNEGSIDNMATDRENEAATDGSKDASTEQKNDVPTDME 523
E ALKSGQ+PADLN+ + + + N+ D++++ +D + ND T ME
Sbjct: 227 EQALKSGQLPADLNLLE-------DNTAQNITKDKDDKTMSDSGDEEHV--TNDESTPME 277
Query: 524 QE 529
QE
Sbjct: 278 QE 279
Score = 30.4 bits (67), Expect(3) = 1e-26
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 244 AAIVNSQTLEEVARL 288
AAIVNSQTLEEVARL
Sbjct: 212 AAIVNSQTLEEVARL 226
>ref|XP_004157628.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like, partial
[Cucumis sativus]
Length = 275
Score = 99.4 bits (246), Expect(3) = 4e-25
Identities = 51/81 (62%), Positives = 57/81 (70%)
Frame = +3
Query: 3 NLAEIDPLASLTKLQYLSLLDNNIIKKPNYRLYVIHKLKALRVLDFKKVKQKERIXXXXX 182
NL EIDPLASL+KLQ+LSLLDNNI KKPNYRLYVIHKLK++RVLDFKKV+ KER+
Sbjct: 102 NLVEIDPLASLSKLQFLSLLDNNITKKPNYRLYVIHKLKSVRVLDFKKVRNKERLEARNL 161
Query: 183 XXXXXXXXXXXXXXXXTFVPG 245
TFVPG
Sbjct: 162 FSSKEVEEEAKKESVKTFVPG 182
Score = 32.0 bits (71), Expect(3) = 4e-25
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 344 E*ALKSGQVPADLNIWDASKTINNEGSIDNMATDRENEAATDGSKDASTEQKNDVP 511
E ALKSGQ+PADLN+ + + + N+ D++++ +D + P
Sbjct: 227 EQALKSGQLPADLNLLE-------DNTAQNITKDKDDKTMSDSGDEEHVTNDESTP 275
Score = 30.4 bits (67), Expect(3) = 4e-25
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 244 AAIVNSQTLEEVARL 288
AAIVNSQTLEEVARL
Sbjct: 212 AAIVNSQTLEEVARL 226