BLASTX nr result

ID: Atractylodes22_contig00032454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032454
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi...   188   3e-46
ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cu...   187   8e-46
gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]              186   1e-45
ref|XP_002529941.1| Auxin response factor, putative [Ricinus com...   183   1e-44
gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   183   1e-44

>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/119 (75%), Positives = 97/119 (81%)
 Frame = +1

Query: 1   LADLETDEVYATIRLIPLGNIDTGYNGXXXXXXXXXXXXXKPSSFAKTLTQSDANNGGGF 180
           +AD ETDEVYA IRL+P+ N +                  KP+SFAKTLTQSDANNGGGF
Sbjct: 67  MADPETDEVYAKIRLVPIANNELDCEDDGVMGSSGSEAPEKPASFAKTLTQSDANNGGGF 126

Query: 181 SVPRFCAETMFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 357
           SVPR+CAET+FPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN
Sbjct: 127 SVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 185


>ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
           gi|449531181|ref|XP_004172566.1| PREDICTED: auxin
           response factor 18-like [Cucumis sativus]
          Length = 716

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/120 (74%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   LADLETDEVYATIRLIPLGNIDTGYNGXXXXXXXXXXXXX-KPSSFAKTLTQSDANNGGG 177
           LADLETDEV+A +R++PL N D  +                KP+SFAKTLTQSDANNGGG
Sbjct: 67  LADLETDEVFANVRMVPLPNSDLNFEEEGGFGSSGSENNMEKPASFAKTLTQSDANNGGG 126

Query: 178 FSVPRFCAETMFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 357
           FSVPR+CAET+FPRLDY+ADPPVQTVIAKDVHGE+WKFRHIYRGTPRRHLLTTGWSTFVN
Sbjct: 127 FSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 186


>gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
          Length = 443

 Score =  186 bits (473), Expect = 1e-45
 Identities = 89/119 (74%), Positives = 99/119 (83%)
 Frame = +1

Query: 1   LADLETDEVYATIRLIPLGNIDTGYNGXXXXXXXXXXXXXKPSSFAKTLTQSDANNGGGF 180
           LAD+ETDEVYA IRL+P+GN +  +               KP+SFAKTLTQSDANNGGGF
Sbjct: 68  LADVETDEVYAKIRLVPVGNNEPEFEDAVLGSSASETAE-KPTSFAKTLTQSDANNGGGF 126

Query: 181 SVPRFCAETMFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 357
           SVPR+CAET+FPRLDY+ADPPVQTV+AKDVHGE WKFRHIYRGTPRRHLLTTGWSTFVN
Sbjct: 127 SVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVN 185


>ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
           gi|223530571|gb|EEF32449.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 709

 Score =  183 bits (464), Expect = 1e-44
 Identities = 90/122 (73%), Positives = 97/122 (79%), Gaps = 3/122 (2%)
 Frame = +1

Query: 1   LADLETDEVYATIRLIPLGNIDTGYN---GXXXXXXXXXXXXXKPSSFAKTLTQSDANNG 171
           LAD ETDEVYA I L PL + +  +    G             KP+SFAKTLTQSDANNG
Sbjct: 65  LADSETDEVYAKISLFPLPSNELDFGDEIGLCDTSTNGTNSTEKPTSFAKTLTQSDANNG 124

Query: 172 GGFSVPRFCAETMFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 351
           GGFSVPR+CAET+FPRLDYSADPPVQTV+AKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 184

Query: 352 VN 357
           VN
Sbjct: 185 VN 186


>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/119 (73%), Positives = 95/119 (79%)
 Frame = +1

Query: 1   LADLETDEVYATIRLIPLGNIDTGYNGXXXXXXXXXXXXXKPSSFAKTLTQSDANNGGGF 180
           +AD  TDEVYA IRL+PL   + GY               KP+SFAKTLTQSDANNGGGF
Sbjct: 77  MADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPDKPASFAKTLTQSDANNGGGF 136

Query: 181 SVPRFCAETMFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 357
           SVPR+CAET+FPRLDYSADPPVQT++AKDVHGE WKFRHIYRGTPRRHLLTTG STFVN
Sbjct: 137 SVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGSSTFVN 195


Top