BLASTX nr result

ID: Atractylodes22_contig00032407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032407
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28088.3| unnamed protein product [Vitis vinifera]              273   8e-72
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   273   8e-72
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   273   8e-72
ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago...   268   4e-70
ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-...   264   6e-69

>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  273 bits (699), Expect = 8e-72
 Identities = 131/153 (85%), Positives = 142/153 (92%)
 Frame = -3

Query: 460  PNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTGESTFLVEC 281
            PNMGGKSTLLRATCL VILAQLGSYVPC+MC+LS VD++FTRLGATDRIMTGESTF +EC
Sbjct: 863  PNMGGKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIEC 922

Query: 280  TETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHPLTK 101
            TETASVL+NATQDSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKV+CRLLFATHYHPLTK
Sbjct: 923  TETASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTK 982

Query: 100  EFAAHPHVTLQHMACTFKPMSDNSSSTNQQLVF 2
            EFA+HPHVTLQHMACTF    + SS   Q+LVF
Sbjct: 983  EFASHPHVTLQHMACTFNLKGEKSSGGEQELVF 1015


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  273 bits (699), Expect = 8e-72
 Identities = 131/153 (85%), Positives = 142/153 (92%)
 Frame = -3

Query: 460  PNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTGESTFLVEC 281
            PNMGGKSTLLRATCL VILAQLGSYVPC+MC+LS VD++FTRLGATDRIMTGESTF +EC
Sbjct: 859  PNMGGKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIEC 918

Query: 280  TETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHPLTK 101
            TETASVL+NATQDSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKV+CRLLFATHYHPLTK
Sbjct: 919  TETASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTK 978

Query: 100  EFAAHPHVTLQHMACTFKPMSDNSSSTNQQLVF 2
            EFA+HPHVTLQHMACTF    + SS   Q+LVF
Sbjct: 979  EFASHPHVTLQHMACTFNLKGEKSSGGEQELVF 1011


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  273 bits (699), Expect = 8e-72
 Identities = 131/153 (85%), Positives = 142/153 (92%)
 Frame = -3

Query: 460  PNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTGESTFLVEC 281
            PNMGGKSTLLRATCL VILAQLGSYVPC+MC+LS VD++FTRLGATDRIMTGESTF +EC
Sbjct: 827  PNMGGKSTLLRATCLAVILAQLGSYVPCKMCILSLVDVVFTRLGATDRIMTGESTFFIEC 886

Query: 280  TETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHPLTK 101
            TETASVL+NATQDSLV+LDELGRGTSTFDGYAIAYAVFRHLVEKV+CRLLFATHYHPLTK
Sbjct: 887  TETASVLRNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTK 946

Query: 100  EFAAHPHVTLQHMACTFKPMSDNSSSTNQQLVF 2
            EFA+HPHVTLQHMACTF    + SS   Q+LVF
Sbjct: 947  EFASHPHVTLQHMACTFNLKGEKSSGGEQELVF 979


>ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
            gi|355495528|gb|AES76731.1| DNA mismatch repair protein
            Msh6-2 [Medicago truncatula]
          Length = 1160

 Score =  268 bits (684), Expect = 4e-70
 Identities = 130/153 (84%), Positives = 138/153 (90%)
 Frame = -3

Query: 460  PNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTGESTFLVEC 281
            PNMGGKSTLLRATCL VI+AQLG YVPCE CVLS VDIIFTRLGATDRIM GESTF +EC
Sbjct: 907  PNMGGKSTLLRATCLAVIMAQLGCYVPCENCVLSVVDIIFTRLGATDRIMAGESTFFIEC 966

Query: 280  TETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHPLTK 101
            TETASVL NATQDSLVILDELGRGTSTFDGYAIAYAVFRHL+EKV+CRLLFATHYHPLTK
Sbjct: 967  TETASVLHNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTK 1026

Query: 100  EFAAHPHVTLQHMACTFKPMSDNSSSTNQQLVF 2
            EFA+HP VT+QHMAC FK  SD  S  +Q+LVF
Sbjct: 1027 EFASHPRVTMQHMACAFKSKSDTLSKQDQELVF 1059


>ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
          Length = 1079

 Score =  264 bits (674), Expect = 6e-69
 Identities = 127/153 (83%), Positives = 137/153 (89%)
 Frame = -3

Query: 460  PNMGGKSTLLRATCLVVILAQLGSYVPCEMCVLSPVDIIFTRLGATDRIMTGESTFLVEC 281
            PNMGGKSTLLR+TCL VI+AQLG YVPCE CVLS VDIIFTRLGA DRIMTGESTF +EC
Sbjct: 826  PNMGGKSTLLRSTCLAVIMAQLGCYVPCESCVLSAVDIIFTRLGAKDRIMTGESTFFIEC 885

Query: 280  TETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLVEKVHCRLLFATHYHPLTK 101
            TETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHL+EKV+CR+LFATHYHPLTK
Sbjct: 886  TETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHPLTK 945

Query: 100  EFAAHPHVTLQHMACTFKPMSDNSSSTNQQLVF 2
            EFA+HP V +QHMAC F   SD  S  +Q+LVF
Sbjct: 946  EFASHPRVIMQHMACAFNSKSDTHSMRDQELVF 978


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