BLASTX nr result

ID: Atractylodes22_contig00032377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032377
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234152.1| cytosolic malate dehydrogenase [Solanum lyco...   161   6e-38
ref|XP_003626695.1| Malate dehydrogenase [Medicago truncatula] g...   149   2e-34
tpg|DAA49622.1| TPA: malate dehydrogenase4 [Zea mays]                 148   5e-34
ref|XP_002277543.1| PREDICTED: malate dehydrogenase, cytoplasmic...   148   5e-34
emb|CAN77649.1| hypothetical protein VITISV_032320 [Vitis vinifera]   148   5e-34

>ref|NP_001234152.1| cytosolic malate dehydrogenase [Solanum lycopersicum]
           gi|52139818|gb|AAU29199.1| cytosolic malate
           dehydrogenase [Solanum lycopersicum]
          Length = 334

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/107 (71%), Positives = 81/107 (75%)
 Frame = +3

Query: 3   RLDHNRALNQISENLNVHVGDVKNVIIWGNHSSTQYADASHATVNIGVGHKSVRELVAND 182
           RLDHNRAL QISE LNVHVGDVKNV IWGNHSSTQY D +HATV    G K VRELVAND
Sbjct: 160 RLDHNRALGQISEKLNVHVGDVKNVAIWGNHSSTQYPDVNHATVKTAAGEKPVRELVAND 219

Query: 183 QWLNTEFVTSVQQRGEAIIKXXXXXXXXXXXXXXCDHMHDWILGTPK 323
           QWLNTEF+T+VQQRG AIIK              CDH+HDW+LGTPK
Sbjct: 220 QWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIHDWVLGTPK 266


>ref|XP_003626695.1| Malate dehydrogenase [Medicago truncatula]
           gi|355520717|gb|AET01171.1| Malate dehydrogenase
           [Medicago truncatula]
          Length = 413

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/107 (67%), Positives = 79/107 (73%)
 Frame = +3

Query: 3   RLDHNRALNQISENLNVHVGDVKNVIIWGNHSSTQYADASHATVNIGVGHKSVRELVAND 182
           RLDHNRAL QISE LNV V DVKNVIIWGNHSSTQY D +HATV    G K VRELVA+D
Sbjct: 240 RLDHNRALGQISEKLNVDVSDVKNVIIWGNHSSTQYPDVNHATVATSNGKKHVRELVADD 299

Query: 183 QWLNTEFVTSVQQRGEAIIKXXXXXXXXXXXXXXCDHMHDWILGTPK 323
            WLN+EF+T+VQQRG AIIK              CDH+HDW+LGTPK
Sbjct: 300 NWLNSEFITTVQQRGGAIIKARKLSSALSAASAACDHIHDWVLGTPK 346


>tpg|DAA49622.1| TPA: malate dehydrogenase4 [Zea mays]
          Length = 282

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/123 (56%), Positives = 85/123 (69%)
 Frame = +3

Query: 3   RLDHNRALNQISENLNVHVGDVKNVIIWGNHSSTQYADASHATVNIGVGHKSVRELVAND 182
           RLDHNRAL QISE LNV V DVKNVIIWGNHSS+QY D +HATV    G K VRELV++D
Sbjct: 158 RLDHNRALGQISERLNVQVSDVKNVIIWGNHSSSQYPDVNHATVKTSTGEKPVRELVSDD 217

Query: 183 QWLNTEFVTSVQQRGEAIIKXXXXXXXXXXXXXXCDHMHDWILGTPKVRFLLSLICCLYH 362
           +WLN EF+T+VQQRG AIIK              CDH+ DW+LGTP+   ++  +  L  
Sbjct: 218 EWLNGEFITTVQQRGAAIIKARKFSSALSAASSACDHIRDWVLGTPECTLMVHTVFLLDS 277

Query: 363 FVN 371
           F++
Sbjct: 278 FIH 280


>ref|XP_002277543.1| PREDICTED: malate dehydrogenase, cytoplasmic [Vitis vinifera]
           gi|297734557|emb|CBI16608.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/107 (65%), Positives = 79/107 (73%)
 Frame = +3

Query: 3   RLDHNRALNQISENLNVHVGDVKNVIIWGNHSSTQYADASHATVNIGVGHKSVRELVAND 182
           RLDHNRAL QISE L VHVGDVKN IIWGNHSSTQY D +HATV+   G K VREL+A+D
Sbjct: 158 RLDHNRALGQISEKLFVHVGDVKNAIIWGNHSSTQYPDVNHATVSTCNGEKPVRELIADD 217

Query: 183 QWLNTEFVTSVQQRGEAIIKXXXXXXXXXXXXXXCDHMHDWILGTPK 323
            W+NTEF+T+VQQRG AIIK              CDH+ DW+LGTPK
Sbjct: 218 NWINTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPK 264


>emb|CAN77649.1| hypothetical protein VITISV_032320 [Vitis vinifera]
          Length = 361

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/107 (65%), Positives = 79/107 (73%)
 Frame = +3

Query: 3   RLDHNRALNQISENLNVHVGDVKNVIIWGNHSSTQYADASHATVNIGVGHKSVRELVAND 182
           RLDHNRAL QISE L VHVGDVKN IIWGNHSSTQY D +HATV+   G K VREL+A+D
Sbjct: 187 RLDHNRALGQISEKLFVHVGDVKNAIIWGNHSSTQYPDVNHATVSTCNGEKPVRELIADD 246

Query: 183 QWLNTEFVTSVQQRGEAIIKXXXXXXXXXXXXXXCDHMHDWILGTPK 323
            W+NTEF+T+VQQRG AIIK              CDH+ DW+LGTPK
Sbjct: 247 NWINTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPK 293


Top