BLASTX nr result

ID: Atractylodes22_contig00032316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032316
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25364.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [V...    67   1e-09
ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus...    67   2e-09
ref|XP_003552912.1| PREDICTED: transcription factor RF2b-like [G...    64   1e-08
ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [G...    62   4e-08

>emb|CBI25364.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 53/106 (50%), Positives = 62/106 (58%)
 Frame = +3

Query: 3   RLRMATGEIASCSDGYNLGMHHVPYNQSNFYTNXXXXXXXXXXXXXXXXNMXXXXXXXXX 182
           RL++ATGEI + SD YNLGMHHVPY QS+F+++                NM         
Sbjct: 120 RLKIATGEIMTSSDAYNLGMHHVPYTQSSFFSHQSQPGP----------NM--------- 160

Query: 183 XXXXXXXXXXETLQQDPLGRFQGLDISTRGNSHLVKSEGPSISATE 320
                       LQQDPLGR QGLDIS+RG S LVKSEGPSISA+E
Sbjct: 161 ------------LQQDPLGRLQGLDISSRGPS-LVKSEGPSISASE 193


>ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [Vitis vinifera]
          Length = 344

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   RLRMATGEIASCSDGYNLGMHHVPYNQSNFYT-NXXXXXXXXXXXXXXXXNMXXXXXXXX 179
           RL++ATGEI S S+ ++LGM  + Y  S+F +                  +         
Sbjct: 234 RLKIATGEIMSPSESFDLGMQQMLYTPSSFLSLPQQIGPAGQPNMQLPPFHHSHSNMSTQ 293

Query: 180 XXXXXXXXXXXETLQQDPLGRFQGLDISTRGNSHLVKSEGPSISATE 320
                      E LQ DPLGR QGLDIS+RG SHLVKSEGPSISA E
Sbjct: 294 YLQPINSQPISEILQNDPLGRLQGLDISSRG-SHLVKSEGPSISACE 339


>ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus communis]
           gi|223542513|gb|EEF44053.1| Transcription factor RF2b,
           putative [Ricinus communis]
          Length = 386

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   RLRMATGEIASCSDGYNLGMHHVPYNQSNFYTNXXXXXXXXXXXXXXXXNMXXXXXXXXX 182
           RL++AT EI S S+ +NLGMH +PY  SNF+++                           
Sbjct: 276 RLKIATREIMSPSESFNLGMHQMPYTPSNFFSHPQQSGSANHPNMQFPPYAHSQTSIPGH 335

Query: 183 XXXXXXXXXX-ETLQQDPLGRFQGLDISTRGNSHLVKSEGPSISATE 320
                      E +Q D LGR QGLDIS++G  ++VKSEGPS+SA+E
Sbjct: 336 HLHQTNSHTFSELMQNDSLGRLQGLDISSKG-PNIVKSEGPSLSASE 381


>ref|XP_003552912.1| PREDICTED: transcription factor RF2b-like [Glycine max]
          Length = 380

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   RLRMATGEIASCSDGYNLGMHHVPYNQSNFYT-NXXXXXXXXXXXXXXXXNMXXXXXXXX 179
           RL++ATGE  + S+ +NLGMH +PY  SNF++                            
Sbjct: 270 RLKIATGEALNQSESFNLGMHQMPYAGSNFFSIPPHSGPSGHQNMQLPPFGHSHSTVPTH 329

Query: 180 XXXXXXXXXXXETLQQDPLGRFQGLDISTRGNSHLVKSEGPSISATE 320
                      + LQ D LGR QGLDIS++G + +VKSEGPSISA E
Sbjct: 330 QLQQTNSHQMSDILQNDQLGRLQGLDISSKG-TPVVKSEGPSISANE 375


>ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [Glycine max]
          Length = 385

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   RLRMATGEIASCSDGYNLGMHHVPYNQSNFYT-NXXXXXXXXXXXXXXXXNMXXXXXXXX 179
           RL++ATGE  + S+ +NLGMH +PY   NF++                            
Sbjct: 275 RLKIATGEALNQSESFNLGMHQMPYAGPNFFSIPPHSGPSGHQNMQLPPFGHSQSTVPTH 334

Query: 180 XXXXXXXXXXXETLQQDPLGRFQGLDISTRGNSHLVKSEGPSISATE 320
                      + LQ D LGR QGLDIS++G + +VKSEGPSISA E
Sbjct: 335 QLQQTNSHQMSDILQNDQLGRLQGLDISSKG-TPMVKSEGPSISANE 380


Top