BLASTX nr result

ID: Atractylodes22_contig00032241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032241
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
emb|CBI25399.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...    89   5e-16

>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/79 (68%), Positives = 65/79 (82%)
 Frame = -1

Query: 343 YAQIGSSRQGLELRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDEL 164
           Y + GS   GL LRNVMK++GVKKEPGYSWISV+G VHKF + DQ+HP+K ++Y  L+EL
Sbjct: 740 YIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEEL 799

Query: 163 REKIKAMGYVPDLRYALES 107
           REKIKAMGYVPDLRY L +
Sbjct: 800 REKIKAMGYVPDLRYVLNN 818


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/77 (61%), Positives = 60/77 (77%)
 Frame = -1

Query: 343 YAQIGSSRQGLELRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDEL 164
           Y + GS + GL LR+VMKE+GVKKEPG SWISV G++HKF A DQ+HPEKDK+Y  L+EL
Sbjct: 690 YIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEEL 749

Query: 163 REKIKAMGYVPDLRYAL 113
           + K+ ++  VPDL Y L
Sbjct: 750 KLKLISLDDVPDLSYEL 766


>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/67 (67%), Positives = 55/67 (82%)
 Frame = -1

Query: 343 YAQIGSSRQGLELRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDEL 164
           Y + GS   GL LRNVMK++GVKKEPGYSWISV+G VHKF + DQ+HP+K ++Y  L+EL
Sbjct: 686 YIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEEL 745

Query: 163 REKIKAM 143
           REKIKAM
Sbjct: 746 REKIKAM 752


>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = -1

Query: 343 YAQIGSSRQGLELRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDEL 164
           Y + GS + GL LR++MKE+GVKKEPG SWISV G++HKF A DQ+HPEKDK+Y  L+EL
Sbjct: 690 YIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEEL 749

Query: 163 REKIKAMGYVPDLRYAL 113
           + K+ ++  VPDL Y L
Sbjct: 750 KLKLISLDDVPDLSYEL 766


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/77 (53%), Positives = 53/77 (68%)
 Frame = -1

Query: 343 YAQIGSSRQGLELRNVMKERGVKKEPGYSWISVRGSVHKFRAQDQEHPEKDKLYFVLDEL 164
           YA  G  R   +LR +MKERGVKKEPG SWI V G VH F A DQ HP  +++Y  L+ L
Sbjct: 661 YAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEAL 720

Query: 163 REKIKAMGYVPDLRYAL 113
            ++IK++GYVPD R+ +
Sbjct: 721 TKQIKSLGYVPDTRFVM 737


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