BLASTX nr result
ID: Atractylodes22_contig00032238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00032238
(494 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi... 226 1e-57
emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera] 226 1e-57
ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containi... 214 8e-54
ref|XP_002875993.1| pentatricopeptide repeat-containing protein ... 187 8e-46
ref|NP_190543.1| pentatricopeptide repeat-containing protein [Ar... 185 4e-45
>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 226 bits (576), Expect = 1e-57
Identities = 111/162 (68%), Positives = 130/162 (80%)
Frame = -2
Query: 490 LTPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSL 311
L P+ YTLSIVLSICASISA R GK+IHGYIL+ F+ TSLGN L+ +YA CG LDWSL
Sbjct: 479 LKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSL 538
Query: 310 KVFESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
++F M +D+VSWN+MISAYA+HG+G+EAV F++MQ S GVK PD TFTA L+ACS
Sbjct: 539 RIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVK--PDQATFTAVLSACS 596
Query: 130 HAGLVDVGVGIFNSMVNKHGLEPGIDHFSCIVDLLGRAGYLD 5
HAGLVD G IFNSMVN +G EPG DH SCIVDLLGRAGYL+
Sbjct: 597 HAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLE 638
Score = 65.9 bits (159), Expect = 3e-09
Identities = 40/151 (26%), Positives = 77/151 (50%)
Frame = -2
Query: 457 LSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLKVFESMIYKDV 278
+S+ +S S+ R ++H +K + T + N + +Y++CG L VF+ + KD+
Sbjct: 291 VSVMSSCSSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDL 350
Query: 277 VSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACSHAGLVDVGVGI 98
+SWN +I YA+ A+ F MQ++ +EPD T + L + +V +
Sbjct: 351 ISWNIIIMNYAQGNFYRLAILAFLQMQRA---GIEPDEFTIGSLLASSESLEIVK----M 403
Query: 97 FNSMVNKHGLEPGIDHFSCIVDLLGRAGYLD 5
F ++V+K+GL I+ + +V + G ++
Sbjct: 404 FQALVSKNGLNSKIEVSNALVSAFSKHGQIE 434
Score = 65.5 bits (158), Expect = 4e-09
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Frame = -2
Query: 481 DVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLKVF 302
D YT + VLS+C S+ G+E+H ++K + S+ N L+ +Y N G + + +VF
Sbjct: 184 DKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVF 242
Query: 301 ---ESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
ES ++ D +++N MI A GR EEA+ F+ MQ++ + P TF + +++CS
Sbjct: 243 EEAESTVHDD-ITFNVMIGGLASVGRDEEALIMFKEMQEA---CLRPTELTFVSVMSSCS 298
Query: 130 HA 125
A
Sbjct: 299 SA 300
Score = 60.5 bits (145), Expect = 1e-07
Identities = 40/135 (29%), Positives = 65/135 (48%)
Frame = -2
Query: 490 LTPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSL 311
L PD +TLS L+ CA++ G ++H Y ++ T +GNTL++ YA L
Sbjct: 49 LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 108
Query: 310 KVFESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
+VF + DV SW +++SA K G+ A F Q R + V + A +T C+
Sbjct: 109 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFN--QTPRMIPV-----VWNAIITGCA 161
Query: 130 HAGLVDVGVGIFNSM 86
++ + +F M
Sbjct: 162 ENKHTEIALNLFREM 176
>emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 226 bits (576), Expect = 1e-57
Identities = 111/162 (68%), Positives = 130/162 (80%)
Frame = -2
Query: 490 LTPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSL 311
L P+ YTLSIVLSICASISA R GK+IHGYIL+ F+ TSLGN L+ +YA CG LDWSL
Sbjct: 440 LKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSL 499
Query: 310 KVFESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
++F M +D+VSWN+MISAYA+HG+G+EAV F++MQ S GVK PD TFTA L+ACS
Sbjct: 500 RIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVK--PDQATFTAVLSACS 557
Query: 130 HAGLVDVGVGIFNSMVNKHGLEPGIDHFSCIVDLLGRAGYLD 5
HAGLVD G IFNSMVN +G EPG DH SCIVDLLGRAGYL+
Sbjct: 558 HAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLE 599
Score = 65.5 bits (158), Expect = 4e-09
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Frame = -2
Query: 481 DVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLKVF 302
D YT + VLS+C S+ G+E+H ++K + S+ N L+ +Y N G + + +VF
Sbjct: 190 DKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVF 248
Query: 301 ---ESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
ES ++ D +++N MI A GR EEA+ F+ MQ++ + P TF + +++CS
Sbjct: 249 EEAESTVHDD-ITFNVMIGGLASVGRDEEALIMFKEMQEA---CLRPTELTFVSVMSSCS 304
Query: 130 HA 125
A
Sbjct: 305 SA 306
Score = 60.5 bits (145), Expect = 1e-07
Identities = 40/135 (29%), Positives = 65/135 (48%)
Frame = -2
Query: 490 LTPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSL 311
L PD +TLS L+ CA++ G ++H Y ++ T +GNTL++ YA L
Sbjct: 55 LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 114
Query: 310 KVFESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
+VF + DV SW +++SA K G+ A F Q R + V + A +T C+
Sbjct: 115 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFN--QTPRMIPV-----VWNAIITGCA 167
Query: 130 HAGLVDVGVGIFNSM 86
++ + +F M
Sbjct: 168 ENKHTEIALNLFREM 182
>ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 214 bits (544), Expect = 8e-54
Identities = 98/160 (61%), Positives = 130/160 (81%)
Frame = -2
Query: 484 PDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLKV 305
P+ Y+LS+VLSIC+S+SA GK++HGYIL+ + +E SLGN LV +YA CG LD +L+V
Sbjct: 474 PNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRV 533
Query: 304 FESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACSHA 125
F++M+ +D ++WN++ISAYA+HGRGEEAV CFE+MQ S G+K PD TFT+ L+ACSHA
Sbjct: 534 FDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIK--PDQATFTSVLSACSHA 591
Query: 124 GLVDVGVGIFNSMVNKHGLEPGIDHFSCIVDLLGRAGYLD 5
GLVD G+ IF++MV +G P +DHFSCIVDLLGR+GYLD
Sbjct: 592 GLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLD 631
Score = 71.6 bits (174), Expect = 6e-11
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Frame = -2
Query: 481 DVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLKVF 302
D YT + +LS+C S+ F G+ +H ++K + TS+ N+L+ +Y CG + + +VF
Sbjct: 177 DKYTFATMLSLC-SLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVF 235
Query: 301 ESMI---YKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
E +D VS+N+MI +A R E+A F MQK +P TF + +++CS
Sbjct: 236 EEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKG---CFDPTEVTFVSVMSSCS 292
Score = 59.3 bits (142), Expect = 3e-07
Identities = 35/130 (26%), Positives = 67/130 (51%)
Frame = -2
Query: 457 LSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLKVFESMIYKDV 278
+S+ +S S+ R G + +K + ++ N ++ +Y+ G + +FE M +DV
Sbjct: 285 VSVMSSCSSLRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDV 344
Query: 277 VSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACSHAGLVDVGVGI 98
VSWN M+S + + EEA+ + M++ +EPD T+ + L A +V+ +
Sbjct: 345 VSWNIMVSMFLQENLEEEAMLSYLKMRRE---GIEPDEFTYGSLLAATDSLQVVE----M 397
Query: 97 FNSMVNKHGL 68
+S++ K GL
Sbjct: 398 IHSLLCKSGL 407
Score = 54.7 bits (130), Expect = 8e-06
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Frame = -2
Query: 487 TPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLK 308
TPD Y LS ++ A+ G ++H ++ + + N+L++LYA S+K
Sbjct: 42 TPDHYILSTAITAAANARRAAFGAQLHALAVRTGLGAHSHVANSLLSLYAKAHRDLASVK 101
Query: 307 V-FESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
+ F+ + D SW +++SA AK E A+ F+ + K + A +T C+
Sbjct: 102 LTFQEIDCPDAYSWTTLLSACAKLDSVEHALKVFDGIPKGH-------IAVWNAVITGCA 154
Query: 130 HAGLVDVGVGIFNSMVNKHGLEPGIDHFSCIVDL 29
G D G+F M NK G++ F+ ++ L
Sbjct: 155 EKGNRDFAFGLFRDM-NKMGVKADKYTFATMLSL 187
>ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321831|gb|EFH52252.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 731
Score = 187 bits (475), Expect = 8e-46
Identities = 91/162 (56%), Positives = 114/162 (70%)
Frame = -2
Query: 490 LTPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSL 311
+ PD YTLSI+LSIC IS+ G++ H Y L+ F ET +GN + +Y+ CG L SL
Sbjct: 479 IIPDAYTLSILLSICVDISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSL 538
Query: 310 KVFESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
VF M KD VSWNS+ISAYA+HG+GE AV +++MQ KV+PD T +A L+AC
Sbjct: 539 AVFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQDEG--KVDPDAATLSAVLSACG 596
Query: 130 HAGLVDVGVGIFNSMVNKHGLEPGIDHFSCIVDLLGRAGYLD 5
HAGLV G+ IFNSMV HGL P +DHFSC+VDLLGRAG+LD
Sbjct: 597 HAGLVKEGLEIFNSMVEFHGLIPNVDHFSCLVDLLGRAGHLD 638
Score = 66.2 bits (160), Expect = 3e-09
Identities = 40/148 (27%), Positives = 76/148 (51%)
Frame = -2
Query: 457 LSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLKVFESMIYKDV 278
+S+ +S S G ++HG +K Y T + N+ + +Y++ + KVFES+ KD+
Sbjct: 289 VSVMSSCSCETMGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDL 348
Query: 277 VSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACSHAGLVDVGVGI 98
++WN+MIS Y + G+ A+ ++ M G+ V+PD TF + L + ++ +
Sbjct: 349 ITWNTMISGYNQANLGQSALLLYKRM---HGIGVKPDEFTFGSLLASSLDLDALE----M 401
Query: 97 FNSMVNKHGLEPGIDHFSCIVDLLGRAG 14
+ V K GL I+ + ++ + G
Sbjct: 402 VQACVIKFGLSSKIEISNALISAYSKHG 429
Score = 63.2 bits (152), Expect = 2e-08
Identities = 39/135 (28%), Positives = 65/135 (48%)
Frame = -2
Query: 490 LTPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSL 311
L PD Y++S+ ++ + G ++H Y ++ + + NTL++LYA G L
Sbjct: 47 LRPDQYSVSLAITAAGHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYARLGNLASLK 106
Query: 310 KVFESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
+ FE +I DV SW +++SA K G E A F+ M + V V + A +T C
Sbjct: 107 RKFEEIIEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAV------WNAMITGCK 160
Query: 130 HAGLVDVGVGIFNSM 86
+G + +F M
Sbjct: 161 ESGYHGTSIELFREM 175
>ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49740 gi|6723419|emb|CAB66912.1| putative protein
[Arabidopsis thaliana] gi|332645063|gb|AEE78584.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 737
Score = 185 bits (469), Expect = 4e-45
Identities = 90/162 (55%), Positives = 116/162 (71%)
Frame = -2
Query: 490 LTPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSL 311
+ PD YTLS +LSIC S S+ G + H Y+L+ F ET +GN L+ +Y+ CG + SL
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 310 KVFESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
+VF M KDVVSWNS+ISAY++HG GE AV +++MQ KV PD TF+A L+ACS
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEG--KVIPDAATFSAVLSACS 602
Query: 130 HAGLVDVGVGIFNSMVNKHGLEPGIDHFSCIVDLLGRAGYLD 5
HAGLV+ G+ IFNSMV HG+ +DHFSC+VDLLGRAG+LD
Sbjct: 603 HAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLD 644
Score = 63.2 bits (152), Expect = 2e-08
Identities = 39/151 (25%), Positives = 76/151 (50%)
Frame = -2
Query: 457 LSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSLKVFESMIYKDV 278
+S+ S S G ++HG +K Y T + N + +Y++ + KVFES+ KD+
Sbjct: 295 VSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDL 354
Query: 277 VSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACSHAGLVDVGVGI 98
V+WN+MIS+Y + G+ A+ ++ M + V+PD TF + L +++ +
Sbjct: 355 VTWNTMISSYNQAKLGKSAMSVYKRMHI---IGVKPDEFTFGSLLATSLDLDVLE----M 407
Query: 97 FNSMVNKHGLEPGIDHFSCIVDLLGRAGYLD 5
+ + K GL I+ + ++ + G ++
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIE 438
Score = 59.3 bits (142), Expect = 3e-07
Identities = 37/135 (27%), Positives = 64/135 (47%)
Frame = -2
Query: 490 LTPDVYTLSIVLSICASISAFRRGKEIHGYILKFHYFNETSLGNTLVALYANCGVLDWSL 311
L PD Y++S+ ++ + G ++H Y ++ + + NTL++LY G L
Sbjct: 53 LRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLK 112
Query: 310 KVFESMIYKDVVSWNSMISAYAKHGRGEEAVWCFESMQKSRGVKVEPDHTTFTAALTACS 131
K F+ + DV SW +++SA K G E A F+ M + V + + A +T C
Sbjct: 113 KKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAI------WNAMITGCK 166
Query: 130 HAGLVDVGVGIFNSM 86
+G + V +F M
Sbjct: 167 ESGYHETSVELFREM 181