BLASTX nr result

ID: Atractylodes22_contig00032220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032220
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   214   8e-54
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]   214   8e-54
ref|XP_002300673.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   203   1e-50
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   203   1e-50

>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
           vinifera]
          Length = 503

 Score =  214 bits (544), Expect = 8e-54
 Identities = 100/124 (80%), Positives = 112/124 (90%)
 Frame = -2

Query: 373 EDRTTNSATTEKKPRYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGDLEEALYFSSAVPE 194
           +D   ++ T  KKPRYKRRK+AI FAYCGVGYQGMQKNPGAKTIEGDLEEAL+FS AVPE
Sbjct: 21  DDEDCDTTTATKKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPE 80

Query: 193 NDRGCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVERLNNNLPPQFRVFGYKRVT 14
            DRG PKRFD+ARSARTDKGVSAVGQVVSG+FY+DPPG VERLN+NLPPQ R+FG+KRVT
Sbjct: 81  QDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVT 140

Query: 13  ASFS 2
           ASF+
Sbjct: 141 ASFN 144


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score =  214 bits (544), Expect = 8e-54
 Identities = 100/124 (80%), Positives = 112/124 (90%)
 Frame = -2

Query: 373 EDRTTNSATTEKKPRYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGDLEEALYFSSAVPE 194
           +D   ++ T  KKPRYKRRK+AI FAYCGVGYQGMQKNPGAKTIEGDLEEAL+FS AVPE
Sbjct: 9   DDEDCDTTTATKKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPE 68

Query: 193 NDRGCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVERLNNNLPPQFRVFGYKRVT 14
            DRG PKRFD+ARSARTDKGVSAVGQVVSG+FY+DPPG VERLN+NLPPQ R+FG+KRVT
Sbjct: 69  QDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVT 128

Query: 13  ASFS 2
           ASF+
Sbjct: 129 ASFN 132


>ref|XP_002300673.1| predicted protein [Populus trichocarpa] gi|222842399|gb|EEE79946.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  203 bits (517), Expect = 1e-50
 Identities = 96/121 (79%), Positives = 107/121 (88%)
 Frame = -2

Query: 364 TTNSATTEKKPRYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGDLEEALYFSSAVPENDR 185
           T    TT KK RYKRRK+AI FAYCGVGYQGMQKNPGAKTIEGDLEEAL+ + AVPE DR
Sbjct: 2   TPGGDTTTKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDR 61

Query: 184 GCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVERLNNNLPPQFRVFGYKRVTASF 5
           G PKR+D+ARSARTDKGVSAVGQVVSG+FY+DPPG VERL++NL PQFR+FGYKRVT SF
Sbjct: 62  GIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLSPQFRIFGYKRVTGSF 121

Query: 4   S 2
           +
Sbjct: 122 N 122


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Glycine max]
          Length = 548

 Score =  203 bits (516), Expect = 1e-50
 Identities = 97/121 (80%), Positives = 107/121 (88%)
 Frame = -2

Query: 364 TTNSATTEKKPRYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGDLEEALYFSSAVPENDR 185
           T++   T  K RYKRRKVAI FAYCGVGYQGMQKNPGAKTIEGDLEEALY S AVPE DR
Sbjct: 35  TSDDEETGTKKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDR 94

Query: 184 GCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVERLNNNLPPQFRVFGYKRVTASF 5
           G PKR+D+ARSARTDKGVSAVGQVVSG+FY+DPPG V+RLN+NLP Q R+FGYKRVTASF
Sbjct: 95  GVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASF 154

Query: 4   S 2
           +
Sbjct: 155 N 155


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 584

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/119 (80%), Positives = 107/119 (89%)
 Frame = -2

Query: 358 NSATTEKKPRYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGDLEEALYFSSAVPENDRGC 179
           + A T KK RYKRRK+AI FAYCGVGYQGMQKNPGAKTIEGDLEEAL+ S AVPE DRGC
Sbjct: 41  DEAATVKKQRYKRRKMAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGC 100

Query: 178 PKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVERLNNNLPPQFRVFGYKRVTASFS 2
           PKR+D+ARSARTDKGVSAVGQV+SG+FYVDPPG V+RLN+ LP Q R+FGYKRVTASF+
Sbjct: 101 PKRYDWARSARTDKGVSAVGQVISGRFYVDPPGLVDRLNSILPSQIRIFGYKRVTASFN 159


Top