BLASTX nr result

ID: Atractylodes22_contig00032219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032219
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   231   6e-59
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   229   2e-58
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   226   1e-57
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   224   4e-57
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   223   1e-56

>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
           vinifera]
          Length = 503

 Score =  231 bits (588), Expect = 6e-59
 Identities = 114/143 (79%), Positives = 127/143 (88%), Gaps = 1/143 (0%)
 Frame = -2

Query: 427 EEPDSKKLKMS-STTASDDEDRTTNSVITEKKPRYKRRKVAIVFAYCGVGYQGMQKNPGA 251
           +EPD K+ KMS +TT SDDED  T +    KKPRYKRRK+AI FAYCGVGYQGMQKNPGA
Sbjct: 4   QEPDPKRPKMSQTTTTSDDEDCDTTTAT--KKPRYKRRKIAIFFAYCGVGYQGMQKNPGA 61

Query: 250 KTIEGDLEEALYFSGAVPENDRGCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVE 71
           KTIEGDLEEAL+FSGAVPE DRG PKRFD+ARSARTDKGVSAVGQVVSG+FY+DPPG VE
Sbjct: 62  KTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVE 121

Query: 70  RLNNNLPPQFRVFGYKRVTASFS 2
           RLN+NLPPQ R+FG+KRVTASF+
Sbjct: 122 RLNSNLPPQIRIFGFKRVTASFN 144


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
           melo]
          Length = 519

 Score =  229 bits (583), Expect = 2e-58
 Identities = 115/143 (80%), Positives = 125/143 (87%), Gaps = 1/143 (0%)
 Frame = -2

Query: 427 EEPDSKKLKMSSTTA-SDDEDRTTNSVITEKKPRYKRRKVAIVFAYCGVGYQGMQKNPGA 251
           EEPD KKLKMSSTT  SDDED  +NS    KK RYKRRKVAI FAYCGVGYQGMQKNPGA
Sbjct: 19  EEPDPKKLKMSSTTTTSDDEDVNSNSA-APKKQRYKRRKVAIFFAYCGVGYQGMQKNPGA 77

Query: 250 KTIEGDLEEALYFSGAVPENDRGCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVE 71
           KTIE DLEEALY +GAVPE DRG  KR+D+ARSARTDKGVSAVGQVVSG+FY+DPPGFV+
Sbjct: 78  KTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVD 137

Query: 70  RLNNNLPPQFRVFGYKRVTASFS 2
           RLN+NL PQ R+FGYKRVTASF+
Sbjct: 138 RLNSNLSPQIRIFGYKRVTASFN 160


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Cucumis sativus]
          Length = 519

 Score =  226 bits (577), Expect = 1e-57
 Identities = 114/143 (79%), Positives = 124/143 (86%), Gaps = 1/143 (0%)
 Frame = -2

Query: 427 EEPDSKKLKMSSTTA-SDDEDRTTNSVITEKKPRYKRRKVAIVFAYCGVGYQGMQKNPGA 251
           EEP  KKLKMSSTT  SDDED  +NS    KK RYKRRKVAI FAYCGVGYQGMQKNPGA
Sbjct: 19  EEPQPKKLKMSSTTTTSDDEDVNSNSA-APKKQRYKRRKVAIFFAYCGVGYQGMQKNPGA 77

Query: 250 KTIEGDLEEALYFSGAVPENDRGCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVE 71
           KTIE DLEEALY +GAVPE DRG  KR+D+ARSARTDKGVSAVGQVVSG+FY+DPPGFV+
Sbjct: 78  KTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVD 137

Query: 70  RLNNNLPPQFRVFGYKRVTASFS 2
           RLN+NL PQ R+FGYKRVTASF+
Sbjct: 138 RLNSNLSPQIRIFGYKRVTASFN 160


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  224 bits (572), Expect = 4e-57
 Identities = 113/143 (79%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
 Frame = -2

Query: 427 EEPDSKKLKMSSTTA-SDDEDRTTNSVITEKKPRYKRRKVAIVFAYCGVGYQGMQKNPGA 251
           EEP  KKLKMSSTT  SDDED  +NS    KK RYKRRKVA  FAYCGVGYQGMQKNPGA
Sbjct: 19  EEPQPKKLKMSSTTTTSDDEDVNSNSA-APKKQRYKRRKVAXFFAYCGVGYQGMQKNPGA 77

Query: 250 KTIEGDLEEALYFSGAVPENDRGCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVE 71
           KTIE DLEEALY +GAVPE DRG  KR+D+ARSARTDKGVSAVGQVVSG+FY+DPPGFV+
Sbjct: 78  KTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVD 137

Query: 70  RLNNNLPPQFRVFGYKRVTASFS 2
           RLN+NL PQ R+FGYKRVTASF+
Sbjct: 138 RLNSNLSPQIRIFGYKRVTASFN 160


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Glycine max]
          Length = 548

 Score =  223 bits (568), Expect = 1e-56
 Identities = 110/142 (77%), Positives = 122/142 (85%)
 Frame = -2

Query: 427 EEPDSKKLKMSSTTASDDEDRTTNSVITEKKPRYKRRKVAIVFAYCGVGYQGMQKNPGAK 248
           EEP+ KKLKMS+TT+ D+E  T        K RYKRRKVAI FAYCGVGYQGMQKNPGAK
Sbjct: 22  EEPEPKKLKMSTTTSDDEETGT--------KKRYKRRKVAIFFAYCGVGYQGMQKNPGAK 73

Query: 247 TIEGDLEEALYFSGAVPENDRGCPKRFDFARSARTDKGVSAVGQVVSGKFYVDPPGFVER 68
           TIEGDLEEALY SGAVPE DRG PKR+D+ARSARTDKGVSAVGQVVSG+FY+DPPG V+R
Sbjct: 74  TIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDR 133

Query: 67  LNNNLPPQFRVFGYKRVTASFS 2
           LN+NLP Q R+FGYKRVTASF+
Sbjct: 134 LNSNLPSQIRIFGYKRVTASFN 155


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