BLASTX nr result

ID: Atractylodes22_contig00032218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032218
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   125   5e-27
ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   123   1e-26
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch...   123   2e-26
ref|XP_004168165.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   116   2e-24
ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   116   2e-24

>ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 1074

 Score =  125 bits (313), Expect = 5e-27
 Identities = 73/141 (51%), Positives = 80/141 (56%)
 Frame = -3

Query: 425 GILTLPLVTSLLKPHKPHFSILFXXXXXXXXXXXXXXXTLFHQLPIRSRFSSATIPLCSF 246
           GIL LPLV S+LKPH                        L       +  S+AT P    
Sbjct: 2   GILALPLVISVLKPHTA-------------TRLLPSHSLLHRHRHFATTLSAATTPSSPH 48

Query: 245 TNSAITQHDQSPLTIDDSHSNAKERPIKVSIPTFQQAIQRLQEYWASVGCTIMQCSNTEV 66
           + S       S  +   SHSN   R I  S  TFQQAIQRLQEYWASVGC+IMQCSNTEV
Sbjct: 49  SPSPSLSRHSSSYSSSSSHSNT--RSINSSTLTFQQAIQRLQEYWASVGCSIMQCSNTEV 106

Query: 65  GAGTMNPLTFLRVLGPEPWNV 3
           GAGTMNPLT+LRVLGPEPWNV
Sbjct: 107 GAGTMNPLTYLRVLGPEPWNV 127


>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2,
           chloroplastic/mitochondrial-like [Vitis vinifera]
           gi|297734621|emb|CBI16672.3| unnamed protein product
           [Vitis vinifera]
          Length = 1071

 Score =  123 bits (309), Expect = 1e-26
 Identities = 74/141 (52%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
 Frame = -3

Query: 422 ILTLPLVTSLLKPHKP-HFSILFXXXXXXXXXXXXXXXTLFHQLPIRSRFSSATIPLCSF 246
           IL +PLV S+LKPH   HFS                        P+RS  S  TI   + 
Sbjct: 3   ILAIPLVVSVLKPHHSLHFSFFRSRNSSRLCSPFTRIS------PLRS--SKTTI--AAI 52

Query: 245 TNSAITQHDQSPLTIDDSHSNAKERPIKVSIPTFQQAIQRLQEYWASVGCTIMQCSNTEV 66
           T SAI  +  +    D +         K S+PTFQQAIQRLQEYWASVGC +MQCSNTEV
Sbjct: 53  TTSAIPHNSSTDPNTDSN---------KASVPTFQQAIQRLQEYWASVGCAVMQCSNTEV 103

Query: 65  GAGTMNPLTFLRVLGPEPWNV 3
           GAGTMNPLTFLRVLGPEPWNV
Sbjct: 104 GAGTMNPLTFLRVLGPEPWNV 124


>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
           putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
           Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
          Length = 1069

 Score =  123 bits (308), Expect = 2e-26
 Identities = 71/140 (50%), Positives = 82/140 (58%)
 Frame = -3

Query: 422 ILTLPLVTSLLKPHKPHFSILFXXXXXXXXXXXXXXXTLFHQLPIRSRFSSATIPLCSFT 243
           ILTLPLV S LKP     S+                     +L +  R  + T  + + +
Sbjct: 3   ILTLPLVISFLKPQTGCLSLFRLYAGRSNPS----------RLGLNRRHLTKTT-VSAIS 51

Query: 242 NSAITQHDQSPLTIDDSHSNAKERPIKVSIPTFQQAIQRLQEYWASVGCTIMQCSNTEVG 63
            SA+ QH         S +     P K S+PTFQQAIQRLQEYWASVGC +MQCSNTEVG
Sbjct: 52  TSAVQQH---------SSAGPNSEPHKASVPTFQQAIQRLQEYWASVGCAVMQCSNTEVG 102

Query: 62  AGTMNPLTFLRVLGPEPWNV 3
           AGTMNPLTFLRVLGPEPWNV
Sbjct: 103 AGTMNPLTFLRVLGPEPWNV 122


>ref|XP_004168165.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 152

 Score =  116 bits (291), Expect = 2e-24
 Identities = 72/140 (51%), Positives = 82/140 (58%)
 Frame = -3

Query: 422 ILTLPLVTSLLKPHKPHFSILFXXXXXXXXXXXXXXXTLFHQLPIRSRFSSATIPLCSFT 243
           IL LPL +S LK H    SI                   F + P R +F+      C+  
Sbjct: 3   ILALPLFSSFLKHHTYLLSI----------SSRKPLSFTFCKSPYRRQFNKT----CA-- 46

Query: 242 NSAITQHDQSPLTIDDSHSNAKERPIKVSIPTFQQAIQRLQEYWASVGCTIMQCSNTEVG 63
            SAIT       T+  S + +K    K S+ TFQQAIQRLQEYWASVGC +MQCSNTEVG
Sbjct: 47  -SAITPST----TLHHSSTGSKTYGSKASVLTFQQAIQRLQEYWASVGCAVMQCSNTEVG 101

Query: 62  AGTMNPLTFLRVLGPEPWNV 3
           AGTMNPLTFLRVLGPEPWNV
Sbjct: 102 AGTMNPLTFLRVLGPEPWNV 121


>ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 1068

 Score =  116 bits (291), Expect = 2e-24
 Identities = 72/140 (51%), Positives = 82/140 (58%)
 Frame = -3

Query: 422 ILTLPLVTSLLKPHKPHFSILFXXXXXXXXXXXXXXXTLFHQLPIRSRFSSATIPLCSFT 243
           IL LPL +S LK H    SI                   F + P R +F+      C+  
Sbjct: 3   ILALPLFSSFLKHHTYLLSI----------SSRKPLSFTFCKSPYRRQFNKT----CA-- 46

Query: 242 NSAITQHDQSPLTIDDSHSNAKERPIKVSIPTFQQAIQRLQEYWASVGCTIMQCSNTEVG 63
            SAIT       T+  S + +K    K S+ TFQQAIQRLQEYWASVGC +MQCSNTEVG
Sbjct: 47  -SAITPST----TLHHSSTGSKTYGSKASVLTFQQAIQRLQEYWASVGCAVMQCSNTEVG 101

Query: 62  AGTMNPLTFLRVLGPEPWNV 3
           AGTMNPLTFLRVLGPEPWNV
Sbjct: 102 AGTMNPLTFLRVLGPEPWNV 121


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