BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032213
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         136   2e-30
gb|AAG59661.1|AC084319_19 putative copia-type pol polyprotein [O...   127   9e-28
gb|ABF97186.1| retrotransposon protein, putative, unclassified [...   127   9e-28
gb|ABA93936.1| retrotransposon protein, putative, unclassified, ...   125   3e-27
gb|ABF95221.1| retrotransposon protein, putative, unclassified [...   125   3e-27

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/95 (69%), Positives = 73/95 (76%)
 Frame = -3

Query: 373 GCKLDKKSITGGCQLLGGKFVRYTSKK*HYMSTSTVEAEYVATGRCCAQILWTKTHLADN 194
           GCK+D+KS TG CQLLGGK V +TSKK H +STST EAEYVA G CCAQ+LW K  LAD 
Sbjct: 255 GCKVDRKSTTGSCQLLGGKLVSWTSKKQHSVSTSTAEAEYVAAGSCCAQVLWMKNQLADY 314

Query: 193 GFAFEKIHIFCDNASAIAITNNSVLHSLMKHIDVR 89
              F +I IFCDN+SAIAI NN VLHS  KHIDVR
Sbjct: 315 DQVFTEIPIFCDNSSAIAIANNPVLHSRSKHIDVR 349


>gb|AAG59661.1|AC084319_19 putative copia-type pol polyprotein [Oryza sativa Japonica Group]
          Length = 1778

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/106 (56%), Positives = 73/106 (68%)
 Frame = -3

Query: 373  GCKLDKKSITGGCQLLGGKFVRYTSKK*HYMSTSTVEAEYVATGRCCAQILWTKTHLADN 194
            GCK+D+KS TG CQ LG   V ++SKK + ++ ST EAEYVA G CCAQ+LW K  L D 
Sbjct: 1462 GCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTTEAEYVAAGSCCAQLLWMKQTLKDF 1521

Query: 193  GFAFEKIHIFCDNASAIAITNNSVLHSLMKHIDVRYHFIHPHIMKG 56
            G+ F KI + CDN SAI I NN V HS  KHID+R+HF+  H  KG
Sbjct: 1522 GYNFTKIPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKG 1567


>gb|ABF97186.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1759

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/106 (56%), Positives = 73/106 (68%)
 Frame = -3

Query: 373  GCKLDKKSITGGCQLLGGKFVRYTSKK*HYMSTSTVEAEYVATGRCCAQILWTKTHLADN 194
            GCK+D+KS TG CQ LG   V ++SKK + ++ ST EAEYVA G CCAQ+LW K  L D 
Sbjct: 1462 GCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTTEAEYVAAGSCCAQLLWMKQTLKDF 1521

Query: 193  GFAFEKIHIFCDNASAIAITNNSVLHSLMKHIDVRYHFIHPHIMKG 56
            G+ F KI + CDN SAI I NN V HS  KHID+R+HF+  H  KG
Sbjct: 1522 GYNFTKIPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKG 1567


>gb|ABA93936.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1533

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/106 (53%), Positives = 73/106 (68%)
 Frame = -3

Query: 373  GCKLDKKSITGGCQLLGGKFVRYTSKK*HYMSTSTVEAEYVATGRCCAQILWTKTHLADN 194
            GCK+D+KS TG CQ LG   V ++SKK ++++ ST EAEYVA G CCAQ++W K  L D 
Sbjct: 1386 GCKVDRKSTTGTCQFLGQSLVSWSSKKQNFIALSTAEAEYVAAGSCCAQLIWMKQTLKDF 1445

Query: 193  GFAFEKIHIFCDNASAIAITNNSVLHSLMKHIDVRYHFIHPHIMKG 56
            G+ F KI + CDN + I I NN V HS  KHID+R+HF+  H  KG
Sbjct: 1446 GYNFTKIPLLCDNENVIKIANNHVQHSRTKHIDIRHHFLRDHETKG 1491


>gb|ABF95221.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2111

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/106 (54%), Positives = 73/106 (68%)
 Frame = -3

Query: 373  GCKLDKKSITGGCQLLGGKFVRYTSKK*HYMSTSTVEAEYVATGRCCAQILWTKTHLADN 194
            GCK+D+KS TG CQ LG   V ++SKK + ++ ST EAEYVA G CCAQ+LW +  L D 
Sbjct: 1420 GCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGSCCAQLLWMRQTLKDF 1479

Query: 193  GFAFEKIHIFCDNASAIAITNNSVLHSLMKHIDVRYHFIHPHIMKG 56
            G+ F KI + CDN SAI I NN + HS  KHID+R+HF+  H  KG
Sbjct: 1480 GYNFTKIPLLCDNESAIKIANNPIQHSRTKHIDIRHHFLRDHETKG 1525