BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032171
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001837349.1| RNA polymerase beta'' subunit [Guizotia abys...    61   4e-09
ref|YP_004465176.1| RNA polymerase beta' subunit [Jacobaea vulga...    61   4e-09
ref|YP_588106.1| RNA polymerase beta'' subunit [Helianthus annuu...    61   4e-09
gb|ABD93761.1| RNA polymerase beta chain [Helianthus annuus]           61   4e-09
gb|AEX99503.1| RNA polymerase beta subunit-2 (chloroplast) [Chry...    60   9e-09

>ref|YP_001837349.1| RNA polymerase beta'' subunit [Guizotia abyssinica]
           gi|212288320|sp|B2LMI2.1|RPOC2_GUIAB RecName:
           Full=DNA-directed RNA polymerase subunit beta'';
           AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
           polymerase subunit beta''; Short=RNA polymerase subunit
           beta'' gi|179366245|gb|ACB86516.1| RNA polymerase beta'
           subunit [Guizotia abyssinica]
          Length = 1381

 Score = 61.2 bits (147), Expect(2) = 4e-09
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +2

Query: 137 DPILKIWDTSIQLVRTCLVLNWDQDKKV 220
           DPIL+IWDTSIQLVRTCLVLNWDQDKK+
Sbjct: 820 DPILEIWDTSIQLVRTCLVLNWDQDKKI 847



 Score = 24.3 bits (51), Expect(2) = 4e-09
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 214 KSSSIEKACASFVE 255
           +   IEKACASFVE
Sbjct: 843 QDKKIEKACASFVE 856


>ref|YP_004465176.1| RNA polymerase beta' subunit [Jacobaea vulgaris]
           gi|308156071|gb|ADO15399.1| RNA polymerase beta' subunit
           [Jacobaea vulgaris]
          Length = 1380

 Score = 61.2 bits (147), Expect(2) = 4e-09
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +2

Query: 137 DPILKIWDTSIQLVRTCLVLNWDQDKKV 220
           DPIL+IWDTSIQLVRTCLVLNWDQDKK+
Sbjct: 817 DPILEIWDTSIQLVRTCLVLNWDQDKKI 844



 Score = 24.3 bits (51), Expect(2) = 4e-09
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 214 KSSSIEKACASFVE 255
           +   IEKACASFVE
Sbjct: 840 QDKKIEKACASFVE 853


>ref|YP_588106.1| RNA polymerase beta'' subunit [Helianthus annuus]
           gi|122179584|sp|Q1KXX0.1|RPOC2_HELAN RecName:
           Full=DNA-directed RNA polymerase subunit beta'';
           AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
           polymerase subunit beta''; Short=RNA polymerase subunit
           beta'' gi|88656884|gb|ABD47135.1| RNA polymerase beta
           subunit [Helianthus annuus]
          Length = 1362

 Score = 61.2 bits (147), Expect(2) = 4e-09
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +2

Query: 137 DPILKIWDTSIQLVRTCLVLNWDQDKKV 220
           DPIL+IWDTSIQLVRTCLVLNWDQDKK+
Sbjct: 820 DPILEIWDTSIQLVRTCLVLNWDQDKKI 847



 Score = 24.3 bits (51), Expect(2) = 4e-09
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 214 KSSSIEKACASFVE 255
           +   IEKACASFVE
Sbjct: 843 QDKKIEKACASFVE 856


>gb|ABD93761.1| RNA polymerase beta chain [Helianthus annuus]
          Length = 861

 Score = 61.2 bits (147), Expect(2) = 4e-09
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +2

Query: 137 DPILKIWDTSIQLVRTCLVLNWDQDKKV 220
           DPIL+IWDTSIQLVRTCLVLNWDQDKK+
Sbjct: 371 DPILEIWDTSIQLVRTCLVLNWDQDKKI 398



 Score = 24.3 bits (51), Expect(2) = 4e-09
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 214 KSSSIEKACASFVE 255
           +   IEKACASFVE
Sbjct: 394 QDKKIEKACASFVE 407


>gb|AEX99503.1| RNA polymerase beta subunit-2 (chloroplast) [Chrysanthemum indicum]
          Length = 1383

 Score = 60.1 bits (144), Expect(2) = 9e-09
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +2

Query: 137 DPILKIWDTSIQLVRTCLVLNWDQDKKV 220
           DPIL+IWDT+IQLVRTCLVLNWDQDKK+
Sbjct: 820 DPILEIWDTNIQLVRTCLVLNWDQDKKI 847



 Score = 24.3 bits (51), Expect(2) = 9e-09
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 214 KSSSIEKACASFVE 255
           +   IEKACASFVE
Sbjct: 843 QDKKIEKACASFVE 856