BLASTX nr result

ID: Atractylodes22_contig00032080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00032080
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   148   5e-34
ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   147   7e-34
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   144   1e-32
ref|XP_002322735.1| tubulin gamma complex-associated protein [Po...   143   1e-32
ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...   141   5e-32

>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/101 (70%), Positives = 81/101 (80%)
 Frame = -3

Query: 304 SVKAPKATKIMIRKLCELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQDELSEYQ 125
           +VK P AT++M+RKLCELGWLFRKVKGYI E+MDRFPAEDVGTV +AFCAALQDELSEY 
Sbjct: 225 NVKVPTATRLMVRKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQDELSEYY 284

Query: 124 KLLTVLQSQSMNPIPLVSETVXXXXXXXXXXXSIWFVEPMV 2
           KLL VL++QSMNPIPL+SE             S+WF EPMV
Sbjct: 285 KLLAVLEAQSMNPIPLISEMASSSNYLSLRRLSVWFAEPMV 325


>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/101 (70%), Positives = 81/101 (80%)
 Frame = -3

Query: 304 SVKAPKATKIMIRKLCELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQDELSEYQ 125
           S+K P+AT+I ++KLCELGWLFRKVKGYI E+MDRFPAEDVGTV +AFCAALQDELS Y 
Sbjct: 224 SIKVPRATRITVQKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQDELSHYY 283

Query: 124 KLLTVLQSQSMNPIPLVSETVXXXXXXXXXXXSIWFVEPMV 2
           KLL VL++QSMNPIPLVSET            S+WF EPMV
Sbjct: 284 KLLAVLEAQSMNPIPLVSETANSGTYLSLRRLSVWFAEPMV 324


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222855271|gb|EEE92818.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/101 (66%), Positives = 81/101 (80%)
 Frame = -3

Query: 304 SVKAPKATKIMIRKLCELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQDELSEYQ 125
           S+K P+ T++M+RKLCELGWLFRKVKGYI E+MDRFPAEDVGTV +AFCAALQDELS+Y 
Sbjct: 230 SIKVPRGTRVMVRKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQDELSDYY 289

Query: 124 KLLTVLQSQSMNPIPLVSETVXXXXXXXXXXXSIWFVEPMV 2
           KLL VL++Q+MNPIPLVS++            S+WF EP V
Sbjct: 290 KLLAVLEAQAMNPIPLVSKSTSSSNYLSLRRLSVWFAEPTV 330


>ref|XP_002322735.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222867365|gb|EEF04496.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 844

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/101 (65%), Positives = 80/101 (79%)
 Frame = -3

Query: 304 SVKAPKATKIMIRKLCELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQDELSEYQ 125
           S+K P+ T++M+RKLCELGWLFRKVKGYI E+MDRFPAEDVGTV +AFCAALQ+EL +Y 
Sbjct: 227 SIKVPRGTRVMVRKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQNELLDYY 286

Query: 124 KLLTVLQSQSMNPIPLVSETVXXXXXXXXXXXSIWFVEPMV 2
           KLL VL++Q+MNPIPLVSET             +WF EP+V
Sbjct: 287 KLLAVLEAQAMNPIPLVSETASSGNYLSLRRLLVWFAEPIV 327


>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/99 (66%), Positives = 78/99 (78%)
 Frame = -3

Query: 301 VKAPKATKIMIRKLCELGWLFRKVKGYICENMDRFPAEDVGTVAKAFCAALQDELSEYQK 122
           VKA +AT+ M+RKLCE+GWLFRKVKGYI E+M+RFPAED+GTV  AFCAALQDELSEY K
Sbjct: 218 VKASRATRTMVRKLCEMGWLFRKVKGYISESMERFPAEDIGTVGHAFCAALQDELSEYYK 277

Query: 121 LLTVLQSQSMNPIPLVSETVXXXXXXXXXXXSIWFVEPM 5
           LL +L++QSMNPIPLVSE             ++WF EPM
Sbjct: 278 LLAILEAQSMNPIPLVSEAASSGNYLSLRRLAVWFAEPM 316


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