BLASTX nr result
ID: Atractylodes22_contig00032036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00032036
(1277 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 189 2e-87
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 186 3e-85
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 183 9e-85
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 191 3e-84
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ... 195 2e-83
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 189 bits (480), Expect(4) = 2e-87
Identities = 84/164 (51%), Positives = 117/164 (71%)
Frame = +3
Query: 213 PATIPGGVCEDIAMDFIEGLPVSHGKDVILVVVDRLSKYGHFMALKHHFSVIDVARVFLD 392
P +P I+MDF+EGLP S GKDVILVVVDRL+KY HF+AL H ++V +V +VF+D
Sbjct: 599 PLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLTKYAHFIALSHPYTVEEVVQVFMD 658
Query: 393 NVYRLHGFLRSIVSDLDKIFVSNFWQELLVLQGTDQNMSSSYHPQTHGRSEVLNRCLEGY 572
N+++LHG +IV+D D++F S F+QE+ Q S++YHPQT G++E +N+CLE Y
Sbjct: 659 NIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESY 718
Query: 573 LRCMCHESPKDWARWLPLAEYWYNTNFHSAINCTPFEWFMGSHP 704
LRCM + P++W W+ LAE+WYNT +H+AI TPF+ G P
Sbjct: 719 LRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSP 762
Score = 101 bits (252), Expect(4) = 2e-87
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = +2
Query: 938 STKLAAKYFGPYPIITKVGTVAYTLKLPLNASIHTTFHVSLLKRHHG--PLPTSLTPVTA 1111
S KL KY+GP+ ++ KVG VAY L+LP A+IH FHVS LK+H G +P P
Sbjct: 839 SLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVG 898
Query: 1112 PRSLIEKIPDQVIDKRTVKQQNRPVIEWLVKWKNIPAEDTTWEDAVAMDKAYPTF 1276
P I+ P V+ +R + + N V +WL+ W N+ + TWEDA + K +P F
Sbjct: 899 PDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVFPNF 953
Score = 54.3 bits (129), Expect(4) = 2e-87
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 769 LTAREEAIKILKQNLNKAQNPMKQAADGHRSERMFEVGDWVYLKLQPYRQ 918
L +E ++ LK ++ AQ MK AD +R+ER EVGD VYLKLQPYRQ
Sbjct: 782 LEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQ 831
Score = 48.1 bits (113), Expect(4) = 2e-87
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 1 FFWPKMKRDVDSHIRDCAFCQKCKTETAAQQGLLQPLPIP 120
F+WP +K+ V++HIR+C CQ K+E GLL PL +P
Sbjct: 564 FYWPGLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVP 603
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 186 bits (473), Expect(4) = 3e-85
Identities = 86/164 (52%), Positives = 111/164 (67%)
Frame = +3
Query: 213 PATIPGGVCEDIAMDFIEGLPVSHGKDVILVVVDRLSKYGHFMALKHHFSVIDVARVFLD 392
P IP I+MDFIEGLP S GK+VI VVVDR +KY H + L H +SV VA+ F+D
Sbjct: 980 PLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFID 1039
Query: 393 NVYRLHGFLRSIVSDLDKIFVSNFWQELLVLQGTDQNMSSSYHPQTHGRSEVLNRCLEGY 572
N+++LHGF +IVSD D+IF S WQEL S++YHPQT G++E +N+C+E Y
Sbjct: 1040 NIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESY 1099
Query: 573 LRCMCHESPKDWARWLPLAEYWYNTNFHSAINCTPFEWFMGSHP 704
LRCM + PK W WLPLAE+WYNT FH+A+ +PF+ G P
Sbjct: 1100 LRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPP 1143
Score = 91.3 bits (225), Expect(4) = 3e-85
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Frame = +2
Query: 908 RTDKSQLKMESTKLAAKYFGPYPIITKVGTVAYTLKLPLNASIHTTFHVSLLKRHHG--P 1081
RT LK ++ KL + ++GP+ ++ +VG VAY L+LP IH FH+S LK+H G
Sbjct: 1211 RTTAFGLK-QALKLTSIFYGPFRVMQRVGKVAYRLQLPEGVGIHPVFHISQLKQHCGANS 1269
Query: 1082 LPTSLTPVTAPRSLIEKIPDQVIDKRTVKQQNRPVIEWLVKWKNIPAEDTTWEDAVAMDK 1261
+P+ P+ I+ P V + R + + + V +WLV+W N+P ED +WEDA +
Sbjct: 1270 IPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLPPEDASWEDASFIKS 1329
Query: 1262 AYPTF 1276
+P F
Sbjct: 1330 TFPEF 1334
Score = 54.7 bits (130), Expect(4) = 3e-85
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 763 DALTAREEAIKILKQNLNKAQNPMKQAADGHRSERMFEVGDWVYLKLQPYR 915
D L ++ ++ LK+NL +AQ MK+ AD +RSER VGD VYLK+QPYR
Sbjct: 1161 DFLEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPYR 1211
Score = 53.1 bits (126), Expect(4) = 3e-85
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +1
Query: 1 FFWPKMKRDVDSHIRDCAFCQKCKTETAAQQGLLQPLPIP 120
F+WP MK+++ + +R+CA CQ+ K E GLL+PLPIP
Sbjct: 945 FYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIP 984
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 183 bits (465), Expect(4) = 9e-85
Identities = 83/164 (50%), Positives = 113/164 (68%)
Frame = +3
Query: 213 PATIPGGVCEDIAMDFIEGLPVSHGKDVILVVVDRLSKYGHFMALKHHFSVIDVARVFLD 392
P +P I MDFIEGLP S GKDVILVVVDRL+KY HF+AL H ++V V ++F+D
Sbjct: 1255 PLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMD 1314
Query: 393 NVYRLHGFLRSIVSDLDKIFVSNFWQELLVLQGTDQNMSSSYHPQTHGRSEVLNRCLEGY 572
N+++LHG IV+D D++F SNF+QE+ Q S+++HPQT G++E +N+CLE Y
Sbjct: 1315 NIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESY 1374
Query: 573 LRCMCHESPKDWARWLPLAEYWYNTNFHSAINCTPFEWFMGSHP 704
LR M + P+ W WL LAE+WYNT +H++I TPF+ G P
Sbjct: 1375 LRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPP 1418
Score = 105 bits (261), Expect(4) = 9e-85
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Frame = +2
Query: 938 STKLAAKYFGPYPIITKVGTVAYTLKLPLNASIHTTFHVSLLKRHHG--PLPTSLTPVTA 1111
S KL +KY+GP+ +I K+G VAY L+LP A IH FHVS LK+H G +P P
Sbjct: 1495 SLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIG 1554
Query: 1112 PRSLIEKIPDQVIDKRTVKQQNRPVIEWLVKWKNIPAEDTTWEDAVAMDKAYPTF 1276
P I+ P V+ +R + + N PV +WL+ W+N+ + TWEDA + A+P F
Sbjct: 1555 PDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWEDASYIQAAFPNF 1609
Score = 51.2 bits (121), Expect(4) = 9e-85
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +1
Query: 799 LKQNLNKAQNPMKQAADGHRSERMFEVGDWVYLKLQPYRQVSV 927
LK ++ +AQ +K AD RSER E+GD VYLKLQPYRQV++
Sbjct: 1448 LKSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAM 1490
Score = 44.3 bits (103), Expect(4) = 9e-85
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +1
Query: 1 FFWPKMKRDVDSHIRDCAFCQKCKTETAAQQGLLQPLPIP 120
F+WP +K+ V+ +IR+C CQ K E GLL PL +P
Sbjct: 1220 FYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVP 1259
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 191 bits (486), Expect(4) = 3e-84
Identities = 88/164 (53%), Positives = 115/164 (70%)
Frame = +3
Query: 213 PATIPGGVCEDIAMDFIEGLPVSHGKDVILVVVDRLSKYGHFMALKHHFSVIDVARVFLD 392
P +P G + I++DFIEGLP S + ILVVVD+ SKY HF+ L H F+ VA+ F+
Sbjct: 1184 PLPVPAGAWQTISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMK 1243
Query: 393 NVYRLHGFLRSIVSDLDKIFVSNFWQELLVLQGTDQNMSSSYHPQTHGRSEVLNRCLEGY 572
N+Y+LHG R+I+SD DKIF S FW +L GTD +MSS+YHPQ+ G++E +N+CLE Y
Sbjct: 1244 NIYKLHGLPRAIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIY 1303
Query: 573 LRCMCHESPKDWARWLPLAEYWYNTNFHSAINCTPFEWFMGSHP 704
LRC H +P W+ WL LAE+WYNT+FHS +N TPFE G P
Sbjct: 1304 LRCFVHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLYGYTP 1347
Score = 85.1 bits (209), Expect(4) = 3e-84
Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 7/116 (6%)
Frame = +2
Query: 944 KLAAKYFGPYPIITKVGTVAYTLKLPLNASIHTTFHVSLLKRHHG-------PLPTSLTP 1102
KLA +Y+GP+ ++++VGTVAY ++LP +SIH FHVS LK G LPTSL
Sbjct: 1425 KLAFRYYGPFQVMSRVGTVAYHIQLPATSSIHPVFHVSQLKAAVGFSKKVQDELPTSLGA 1484
Query: 1103 VTAPRSLIEKIPDQVIDKRTVKQQNRPVIEWLVKWKNIPAEDTTWEDAVAMDKAYP 1270
+ ++P Q +DKR VK+ NR V++ L W + ++TWED + +P
Sbjct: 1485 L--------QVPFQFLDKRLVKKGNRSVLQLLTHWYHSSPSESTWEDMEDLFARFP 1532
Score = 59.7 bits (143), Expect(4) = 3e-84
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +1
Query: 772 TAREEAIKILKQNLNKAQNPMKQAADGHRSERMFEVGDWVYLKLQPYRQVSV 927
T R+ ++L+Q+LN+AQ MK AD RS R F VGDWVYLKLQPY Q V
Sbjct: 1367 TERKFMQQLLQQHLNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFV 1418
Score = 45.8 bits (107), Expect(4) = 3e-84
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 1 FFWPKMKRDVDSHIRDCAFCQKCKTETAAQQGLLQPLPIPGG 126
F WP MK+ + ++ C C + K + A GLLQPLP+P G
Sbjct: 1149 FAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAG 1190
>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 195 bits (495), Expect(4) = 2e-83
Identities = 89/166 (53%), Positives = 117/166 (70%)
Frame = +3
Query: 213 PATIPGGVCEDIAMDFIEGLPVSHGKDVILVVVDRLSKYGHFMALKHHFSVIDVARVFLD 392
P IP G +DI+MDFIEGLP+S G DVILVVVDR +KY HF+ LKH F+ + VA +L
Sbjct: 1166 PLPIPTGAWQDISMDFIEGLPLSKGSDVILVVVDRFTKYAHFLPLKHPFTAVQVADNYLS 1225
Query: 393 NVYRLHGFLRSIVSDLDKIFVSNFWQELLVLQGTDQNMSSSYHPQTHGRSEVLNRCLEGY 572
V L+G +SIVSD DKIF S+FWQ L N++++YHPQ+ G++E +N+CLE Y
Sbjct: 1226 KVASLYGMPKSIVSDRDKIFTSHFWQHLFKRFAIPLNLTTAYHPQSDGQTERVNQCLEMY 1285
Query: 573 LRCMCHESPKDWARWLPLAEYWYNTNFHSAINCTPFEWFMGSHPLY 710
LRC +P W+ WLPLA+YWYNT+FHSA+ C+P + G+ P Y
Sbjct: 1286 LRCAVASAPTKWSSWLPLAQYWYNTSFHSALKCSPHKALYGTDPTY 1331
Score = 85.1 bits (209), Expect(4) = 2e-83
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Frame = +2
Query: 944 KLAAKYFGPYPIITKVGTVAYTLKLPLNASIHTTFHVSLLKR---HHGPLPTSLTPVTAP 1114
KLA KYFGP+ I+ VG+VAY LKLP ++ IH FHVS LK P+ L P A
Sbjct: 1418 KLAFKYFGPFEILAVVGSVAYRLKLPADSLIHPVFHVSQLKSFVPDTKPVFAQL-PTAAQ 1476
Query: 1115 RSLIEKIPDQVIDKRTVKQQNRPVIEWLVKWKNIPAEDTTWEDAVAMDKAYP 1270
+ + IP V+++R VK+ N +++ LV+W ++P TWED + +P
Sbjct: 1477 LDIADLIPSAVLERRLVKKGNAAIVQVLVQWGSLPPALATWEDYDVVRTRFP 1528
Score = 50.4 bits (119), Expect(4) = 2e-83
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 769 LTAREEAIKILKQNLNKAQNPMKQAADGHRSERMFEVGDWVYLKLQPYRQVSV 927
L RE +L+ +L + QN MKQ AD R+ R F+VGD V LKLQPY Q SV
Sbjct: 1359 LKERELFSTMLQHHLARDQNRMKQFADAKRTARSFQVGDLVLLKLQPYAQRSV 1411
Score = 48.9 bits (115), Expect(4) = 2e-83
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +1
Query: 1 FFWPKMKRDVDSHIRDCAFCQKCKTETAAQQGLLQPLPIPGG 126
F W +K V+ I+ C CQK K E + GLLQPLPIP G
Sbjct: 1131 FVWKGLKHSVEEFIQQCVVCQKAKHEHCSSPGLLQPLPIPTG 1172