BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031993
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...   134   1e-29
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...   116   2e-24
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]              116   2e-24
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   116   2e-24
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...    99   5e-19

>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score =  134 bits (336), Expect = 1e-29
 Identities = 74/147 (50%), Positives = 93/147 (63%), Gaps = 11/147 (7%)
 Frame = +3

Query: 105 GILGSAPAPY----PSQATSLPS----AFSTMTLQDPT---WNMDTGXXXXXXXXXXXXX 251
           G+LGS+P        +Q T +P+    AF T T+ DPT   W MDTG             
Sbjct: 259 GLLGSSPQAAMVGSTNQLTQIPANLAAAFGTTTMPDPTDASWYMDTGATTHLTAQPGTLH 318

Query: 252 TLFNKRLFPSVHVGDGNSIPVTNTGHSIIPSSHRPLHLHNVLVTPNIIKNLISVRQFTRD 431
           +LFN    PSV VG+G+S+P    G+S +PS  RPLHLHNVLV P+IIKNL+SVRQFT+D
Sbjct: 319 SLFNSSSSPSVVVGNGSSVPTKAIGYSFLPSKIRPLHLHNVLVCPSIIKNLVSVRQFTKD 378

Query: 432 NNCTIEFDAFGFSVKDFWTRHILLRCD 512
           N  ++EFD FGFS+KDF T   LLRC+
Sbjct: 379 NYVSVEFDPFGFSIKDFNTWTNLLRCN 405


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/135 (48%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
 Frame = +3

Query: 129 PYPSQATSLPSAFSTMTLQDPT---WNMDTGXXXXXXXXXXXXXTLFNKRLFPSVH---- 287
           P P     L  AF+T +LQDP    W MD+G              L    L+PS+     
Sbjct: 257 PKPESTADLAEAFNTFSLQDPPDSQWYMDSGATAYLTSGAGNNLQL---SLYPSIGKSVI 313

Query: 288 VGDGNSIPVTNTGHSIIPSSHRPLHLHNVLVTPNIIKNLISVRQFTRDNNCTIEFDAFGF 467
            G+G  IPVT TG   I +  RPL LHNVLVTP+IIKNL+SVR+FT+DN C+IEFD FGF
Sbjct: 314 FGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDPFGF 373

Query: 468 SVKDFWTRHILLRCD 512
           S+KD  T+  LLR D
Sbjct: 374 SIKDLRTKRTLLRND 388


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/135 (48%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
 Frame = +3

Query: 129 PYPSQATSLPSAFSTMTLQDPT---WNMDTGXXXXXXXXXXXXXTLFNKRLFPSVH---- 287
           P P     L  AF+T +LQDP    W MD+G              L    L+PS+     
Sbjct: 253 PKPESTADLAEAFNTFSLQDPPDSQWYMDSGATAYLTSGAGNNLQL---SLYPSIGKSVI 309

Query: 288 VGDGNSIPVTNTGHSIIPSSHRPLHLHNVLVTPNIIKNLISVRQFTRDNNCTIEFDAFGF 467
            G+G  IPVT TG   I +  RPL LHNVLVTP+IIKNL+SVR+FT+DN C+IEFD FGF
Sbjct: 310 FGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDPFGF 369

Query: 468 SVKDFWTRHILLRCD 512
           S+KD  T+  LLR D
Sbjct: 370 SIKDLRTKRTLLRND 384


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  116 bits (291), Expect = 2e-24
 Identities = 69/158 (43%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
 Frame = +3

Query: 102 PGILGSAPA------------PYPSQATSLPS-------AFSTMTLQ--DPTWNMDTGXX 218
           PGILG  P+            PYP+ +  +         AF+TMTLQ  DP W MD+   
Sbjct: 310 PGILGPHPSQPTHAAHMANVYPYPTPSAPMSQLPPGLIHAFNTMTLQEPDPNWYMDSAAT 369

Query: 219 XXXXXXXXXXXTLFNKRLFPSVHVGDGNSIPVTNTGHSIIPSSHRPLHLHNVLVTPNIIK 398
                      + FN    P V VG+G+  PV   GH  +    R   L NVLV P I+K
Sbjct: 370 SHITSNIGNLQSTFNTSTMPLVTVGNGSLAPVETIGHGTLSYPSRSFSLRNVLVCPAIVK 429

Query: 399 NLISVRQFTRDNNCTIEFDAFGFSVKDFWTRHILLRCD 512
           NL+SVR+F  DN CTIEFD FGFSVKD  TR+ LLRCD
Sbjct: 430 NLVSVRKFVTDNWCTIEFDPFGFSVKDLKTRNKLLRCD 467


>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 62/158 (39%), Positives = 86/158 (54%), Gaps = 20/158 (12%)
 Frame = +3

Query: 99  SPGILGSAP-------APYPS-----------QATSLPSAFSTMTLQDP-TWNMDTGXXX 221
           S GILG  P        PY S               L +A + MTL +P +W ++TG   
Sbjct: 300 SAGILGPYPQAHTAFAGPYSSPPPAGSVQLAWDQAGLVAALNGMTLHNPNSWVLNTGATS 359

Query: 222 XXXXXXXXXXT-LFNKRLFPSVHVGDGNSIPVTNTGHSIIPSSHRPLHLHNVLVTPNIIK 398
                     T L N + +  + VG+G+SIPV   G S +P       L +VLV P++++
Sbjct: 360 HMSSTDGILVTRLPNSQTY--ITVGNGHSIPVVCRGTSFLPIGTTRFDLRHVLVAPSLVR 417

Query: 399 NLISVRQFTRDNNCTIEFDAFGFSVKDFWTRHILLRCD 512
           NL+S+RQFTRDN C+IEFD FGFS+KD  TR ++LRC+
Sbjct: 418 NLLSIRQFTRDNKCSIEFDEFGFSIKDPQTRRVILRCN 455