BLASTX nr result

ID: Atractylodes22_contig00031962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031962
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    73   3e-11
ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    72   4e-11
ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    66   3e-09

>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
 Frame = +3

Query: 24   TDVTQQLPQPTYQDDHS-NLNQPAVQEMRVDME-TETIQPSVELGMSFMHEELEDSGELQ 197
            TD+ QQ      + +H+ + NQPA Q+MR++ E T    PSVE+GM FMHEE+E+ G L 
Sbjct: 2036 TDIQQQQGTTHVEGNHAAHQNQPAEQDMRIESEDTMPTNPSVEIGMDFMHEEMEEGGVLH 2095

Query: 198  IPDQIEMTFHVENRVGNNTGDED 266
              DQIEMTF VENR G++ GDED
Sbjct: 2096 NTDQIEMTFRVENRAGDDMGDED 2118


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
 Frame = +3

Query: 21   GTDVTQQLPQPTYQDDHS-NLNQPAVQEMRVDME-TETIQPSVELGMSFMHEELEDSGEL 194
            GTD+ QQ        +H+ + N+ A Q+MR++ E T    PS+E+G+ FM EE+E+ G L
Sbjct: 2069 GTDIQQQEGTTHVDGNHAVHQNESAEQDMRLESEDTMATNPSMEVGLDFMREEMEEGGVL 2128

Query: 195  QIPDQIEMTFHVENRVGNNTGDED 266
                QIEMTFHVENR  ++ GDED
Sbjct: 2129 HNTGQIEMTFHVENRADDDMGDED 2152


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/91 (49%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
 Frame = +3

Query: 3    SQHEVTGTDVTQQLPQPTYQDDH--SNLNQPAVQEMRVDMETETIQ-PSVELGMSFMHEE 173
            SQ  +  T +   L Q T Q D    N NQ   Q+MRV+      Q PS+ELGM FM EE
Sbjct: 2055 SQEAIRDT-MDNALDQGTSQGDDRADNPNQSMEQDMRVEERGVMAQNPSMELGMDFMREE 2113

Query: 174  LEDSGELQIPDQIEMTFHVENRVGNNTGDED 266
            + + G L  PDQIEMTFHVENR  ++ GDED
Sbjct: 2114 MGEGGVLHNPDQIEMTFHVENRAHDDMGDED 2144


>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = +3

Query: 12   EVTGTDVTQQLPQPTYQDD---HSNLNQPAVQEMRVDMETE-TIQPSVELGMSFMHEELE 179
            +  GT+  Q+ PQ   Q +    +N +Q   QEMR+++E   T  P +ELGM FM EE++
Sbjct: 2444 DAAGTE--QRQPQGISQSEGNHDANQDQSVEQEMRIEVEEAMTANPPMELGMDFMREEMD 2501

Query: 180  DSGELQIPDQIEMTFHVENRVGNNTGDED 266
            + G L   DQIEMT+HVENR  ++ GDED
Sbjct: 2502 EGGVLHNTDQIEMTYHVENRADDDMGDED 2530


>ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL1-like
            [Cucumis sativus]
          Length = 3692

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = +3

Query: 27   DVTQQLPQPTYQDDHSNL--NQPAVQEMRVDME-TETIQPSVELGMSFMHEELEDSGELQ 197
            D  QQ    T  D + N   N+   QEMR+++E T      +ELGM FM EE+E++G L 
Sbjct: 2011 DNNQQEFAATQNDGNINTQTNRSLEQEMRLEVEGTMAANEHMELGMEFMREEMEEAGVLH 2070

Query: 198  IPDQIEMTFHVENRVGNNTGDED 266
              DQIEM FHVENR     GDED
Sbjct: 2071 NSDQIEMNFHVENRADEEMGDED 2093


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