BLASTX nr result

ID: Atractylodes22_contig00031957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031957
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   211   1e-52
ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   209   3e-52
ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...   208   6e-52
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago...   200   2e-49

>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 600

 Score =  211 bits (536), Expect = 1e-52
 Identities = 104/144 (72%), Positives = 120/144 (83%)
 Frame = -1

Query: 539 LKVAAVLDELPISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTL 360
           LKVAAV+DELP+ LH+KYLFC+SPADM DEI SQGLTQFA  YAKKG+VRLREIFTPG+L
Sbjct: 456 LKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLTQFAENYAKKGLVRLREIFTPGSL 515

Query: 359 KVPKTEVELKELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQ 180
           KVPKT   LKELESIHKVL+LYVWLSFRLE+SFPD EL  SQK+IC MLIEEFLERLG+Q
Sbjct: 516 KVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHELAVSQKAICSMLIEEFLERLGWQ 575

Query: 179 KPLPKQLKQFR*PSNA*SSNIYHC 108
           KP+ ++L   +  S   S ++  C
Sbjct: 576 KPMARRLASHKMSSPLLSQHMRKC 599


>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 565

 Score =  209 bits (532), Expect = 3e-52
 Identities = 104/141 (73%), Positives = 121/141 (85%)
 Frame = -1

Query: 539 LKVAAVLDELPISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTL 360
           LKVAAV+DELP+ LH+KYLFC+SPADM DEI SQGL QFA  YAKKG+VRLREIFTPG+L
Sbjct: 421 LKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLAQFAENYAKKGLVRLREIFTPGSL 480

Query: 359 KVPKTEVELKELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQ 180
           KVPKT   LKELESIHKVL+LYVWLSFRLE+SFPD EL +SQK+IC MLIEEFLERLG+Q
Sbjct: 481 KVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHELAASQKAICSMLIEEFLERLGWQ 540

Query: 179 KPLPKQLKQFR*PSNA*SSNI 117
           KP+ ++L     PS+  SS++
Sbjct: 541 KPMARRL-----PSHKMSSSL 556


>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
           gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
           helicase, putative [Ricinus communis]
          Length = 547

 Score =  208 bits (529), Expect = 6e-52
 Identities = 102/141 (72%), Positives = 121/141 (85%)
 Frame = -1

Query: 539 LKVAAVLDELPISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTL 360
           LKVAAV+DE+P+SL+DKYLFC+SP DM+DEI SQGLTQFA  YAKKGIVRL+EIFTPGTL
Sbjct: 403 LKVAAVIDEMPLSLNDKYLFCISPVDMNDEISSQGLTQFAENYAKKGIVRLKEIFTPGTL 462

Query: 359 KVPKTEVELKELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQ 180
           +VPKT+  LKELES+HKVL+LYVWLS+RLEDSFPDREL +SQK+IC +LIEEFLERLG+Q
Sbjct: 463 QVPKTQTALKELESVHKVLDLYVWLSYRLEDSFPDRELAASQKAICSLLIEEFLERLGWQ 522

Query: 179 KPLPKQLKQFR*PSNA*SSNI 117
           KP   +L      S+  S +I
Sbjct: 523 KPRTTKLSSRNKTSSLLSKDI 543


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  201 bits (510), Expect = 1e-49
 Identities = 102/128 (79%), Positives = 113/128 (88%)
 Frame = -1

Query: 539 LKVAAVLDELPISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTL 360
           LKVAAV+D LPISLHDKYLF +SP DM +EI SQGLTQFA  YA+KGIVRL+EIFTPGTL
Sbjct: 426 LKVAAVVDVLPISLHDKYLFVISPVDMRNEISSQGLTQFAQNYAQKGIVRLKEIFTPGTL 485

Query: 359 KVPKTEVELKELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQ 180
           +VPKTE  LKELESIHKVL+LYVWLSFRLEDSFPDREL +SQK+ICG+LIEEFLER G+Q
Sbjct: 486 QVPKTESALKELESIHKVLDLYVWLSFRLEDSFPDRELAASQKAICGLLIEEFLERFGWQ 545

Query: 179 KPLPKQLK 156
           K  PK  K
Sbjct: 546 KQ-PKTRK 552


>ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago truncatula]
           gi|355512092|gb|AES93715.1| ATP-dependent RNA helicase
           SUPV3L1 [Medicago truncatula]
          Length = 570

 Score =  200 bits (508), Expect = 2e-49
 Identities = 96/127 (75%), Positives = 109/127 (85%)
 Frame = -1

Query: 539 LKVAAVLDELPISLHDKYLFCLSPADMSDEILSQGLTQFAHTYAKKGIVRLREIFTPGTL 360
           LKVAAV+DE P+ L DKYLFC+SPADM DEI SQGLTQF   YAKKG+VRLREIFTPGTL
Sbjct: 426 LKVAAVVDEFPLELRDKYLFCISPADMDDEISSQGLTQFVENYAKKGLVRLREIFTPGTL 485

Query: 359 KVPKTEVELKELESIHKVLELYVWLSFRLEDSFPDRELGSSQKSICGMLIEEFLERLGFQ 180
           KVP T   LK+LESIHKVL+LYVWLSFRLEDSFPD EL  SQK++C MLIEEFL+R G+Q
Sbjct: 486 KVPTTPQALKDLESIHKVLDLYVWLSFRLEDSFPDHELAKSQKALCSMLIEEFLDRYGWQ 545

Query: 179 KPLPKQL 159
           KP+ ++L
Sbjct: 546 KPMARRL 552


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