BLASTX nr result

ID: Atractylodes22_contig00031923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031923
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34367.3| unnamed protein product [Vitis vinifera]              482   e-134
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   482   e-134
ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, pa...   472   e-131
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu...   472   e-131
ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp....   471   e-130

>emb|CBI34367.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score =  482 bits (1240), Expect = e-134
 Identities = 243/279 (87%), Positives = 261/279 (93%), Gaps = 5/279 (1%)
 Frame = +1

Query: 1    ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 180
            ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA
Sbjct: 573  ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 632

Query: 181  TSHIERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 360
            TSH+ERTKILEAFKT K+VNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI
Sbjct: 633  TSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 692

Query: 361  LRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPD 540
            LRAKGRLQDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPPPD
Sbjct: 693  LRAKGRLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPD 752

Query: 541  TGAELSYHRLDDQLSLLGKVLSAGDDAVGLEILEDDTDDIALQKARARRLMGSMSAMSGA 720
            +GA+LSYHRLD+QL+LLGKVLSAGDDAVGLE L++D DDIALQK  ARR +GSMSAMSGA
Sbjct: 753  SGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALQK--ARRSVGSMSAMSGA 810

Query: 721  KGMIYHEFRTGQNRFS-----KSKPKDPAKRHQLFKKRF 822
             GM+Y E+ TG+N+       K KPKDP+KRH LFK+RF
Sbjct: 811  SGMVYMEYNTGRNKHGGQGQIKGKPKDPSKRHHLFKRRF 849


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  482 bits (1240), Expect = e-134
 Identities = 243/279 (87%), Positives = 261/279 (93%), Gaps = 5/279 (1%)
 Frame = +1

Query: 1    ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 180
            ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA
Sbjct: 494  ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 553

Query: 181  TSHIERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 360
            TSH+ERTKILEAFKT K+VNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI
Sbjct: 554  TSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 613

Query: 361  LRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPD 540
            LRAKGRLQDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPPPD
Sbjct: 614  LRAKGRLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPD 673

Query: 541  TGAELSYHRLDDQLSLLGKVLSAGDDAVGLEILEDDTDDIALQKARARRLMGSMSAMSGA 720
            +GA+LSYHRLD+QL+LLGKVLSAGDDAVGLE L++D DDIALQK  ARR +GSMSAMSGA
Sbjct: 674  SGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALQK--ARRSVGSMSAMSGA 731

Query: 721  KGMIYHEFRTGQNRFS-----KSKPKDPAKRHQLFKKRF 822
             GM+Y E+ TG+N+       K KPKDP+KRH LFK+RF
Sbjct: 732  SGMVYMEYNTGRNKHGGQGQIKGKPKDPSKRHHLFKRRF 770


>ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
          Length = 725

 Score =  472 bits (1215), Expect = e-131
 Identities = 245/278 (88%), Positives = 253/278 (91%), Gaps = 4/278 (1%)
 Frame = +1

Query: 1    ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 180
            ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA
Sbjct: 449  ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 508

Query: 181  TSHIERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 360
            TSHIERTKILEAFKTS++VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI
Sbjct: 509  TSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 568

Query: 361  LRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPD 540
            LRAKG+ QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D
Sbjct: 569  LRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPAD 628

Query: 541  TGAELSYHRLDDQLSLLGKVLSAGDDAVGLEILEDDTDDIALQKARARRLMGSMSAMSGA 720
             GAELSYHRLDDQL+LLGKVL+AGDD VGLE LEDD D IAL    ARR  GSMSAMSGA
Sbjct: 629  AGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALD--AARRSKGSMSAMSGA 686

Query: 721  KGMIYHEFRTGQNRFS----KSKPKDPAKRHQLFKKRF 822
             GM+Y E+ TG+        KSKPKDPAKRH LFKKRF
Sbjct: 687  NGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 724


>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
          Length = 768

 Score =  472 bits (1215), Expect = e-131
 Identities = 245/278 (88%), Positives = 253/278 (91%), Gaps = 4/278 (1%)
 Frame = +1

Query: 1    ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 180
            ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA
Sbjct: 492  ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 551

Query: 181  TSHIERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 360
            TSHIERTKILEAFKTS++VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI
Sbjct: 552  TSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 611

Query: 361  LRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPD 540
            LRAKG+ QDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D
Sbjct: 612  LRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPAD 671

Query: 541  TGAELSYHRLDDQLSLLGKVLSAGDDAVGLEILEDDTDDIALQKARARRLMGSMSAMSGA 720
             GAELSYHRLDDQL+LLGKVL+AGDD VGLE LEDD D IAL    ARR  GSMSAMSGA
Sbjct: 672  AGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALD--AARRSKGSMSAMSGA 729

Query: 721  KGMIYHEFRTGQNRFS----KSKPKDPAKRHQLFKKRF 822
             GM+Y E+ TG+        KSKPKDPAKRH LFKKRF
Sbjct: 730  NGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKRF 767


>ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316475|gb|EFH46898.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 779

 Score =  471 bits (1212), Expect = e-130
 Identities = 240/277 (86%), Positives = 257/277 (92%), Gaps = 2/277 (0%)
 Frame = +1

Query: 1    ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 180
            ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA
Sbjct: 505  ENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGA 564

Query: 181  TSHIERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 360
            TSHIERTKILEAFKTSK+VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI
Sbjct: 565  TSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRI 624

Query: 361  LRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPD 540
            LRAKG+L+DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPD
Sbjct: 625  LRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPD 684

Query: 541  TGAELSYHRLDDQLSLLGKVLSAGDDAVGLEILEDDTDDIALQKARARRLMGSMSAMSGA 720
             G+ LSYH  ++QLSLLGKVL+AGDD VGLE LE+DTD +ALQK  ARR MGSMS MSGA
Sbjct: 685  AGSSLSYHSQEEQLSLLGKVLNAGDDLVGLEQLEEDTDGMALQK--ARRSMGSMSLMSGA 742

Query: 721  KGMIYHEFRTGQNRFSK--SKPKDPAKRHQLFKKRFV 825
            KGM+Y E+ +G+++  +   KPKDP KRH LFKKR+V
Sbjct: 743  KGMVYMEYNSGRHKSGQQFKKPKDPTKRHNLFKKRYV 779


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