BLASTX nr result

ID: Atractylodes22_contig00031901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031901
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...   143   1e-32
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      138   5e-31
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]               136   2e-30
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   133   1e-29
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma...   133   1e-29

>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/138 (49%), Positives = 89/138 (64%), Gaps = 7/138 (5%)
 Frame = +1

Query: 1   VNIGGERVPESKNFKYFGSVIXXXXXXXXXXTH*IKAGRLKWRATTVVICDKKAPLKL-- 174
           V +  + +P+ ++FKY G+VI          TH + A  +KWR  + V+CDKK PLKL  
Sbjct: 24  VRLAAQVIPKKESFKYLGAVIQGSGDIDDDVTHRVGAAWMKWRLASGVLCDKKIPLKLKG 83

Query: 175 -----AIRPAMLYGFEYWPVKKTQERKLEVAEMRMLRWTCGRTLLDRIPNEVFREELRVA 339
                 +RPA+LYG E WPVK     K+ VAEMRMLRW CG T  D+I NEV RE++ VA
Sbjct: 84  KFYRVVVRPALLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVA 143

Query: 340 PIIDKLREGRLRWFGHIR 393
            ++DKLRE RLRWFGH++
Sbjct: 144 SVVDKLREARLRWFGHVK 161


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/137 (49%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
 Frame = +1

Query: 1   VNIGGERVPESKNFKYFGSVIXXXXXXXXXXTH*IKAGRLKWRATTVVICDKKAPLKL-- 174
           V IG   +P+   FKY GSVI           H I+AG +KWR  + V+CD K P+KL  
Sbjct: 176 VKIGDHIIPQVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRKASGVLCDAKVPIKLKG 235

Query: 175 -----AIRPAMLYGFEYWPVKKTQERKLEVAEMRMLRWTCGRTLLDRIPNEVFREELRVA 339
                A+RP +LYG E W VK   E K+ VAEMRMLRW CG+T  D+I NE  RE + VA
Sbjct: 236 KFYRTAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVA 295

Query: 340 PIIDKLREGRLRWFGHI 390
           PI++K+ E RLRWFGH+
Sbjct: 296 PIVEKMVENRLRWFGHV 312


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/138 (47%), Positives = 87/138 (63%), Gaps = 7/138 (5%)
 Frame = +1

Query: 1   VNIGGERVPESKNFKYFGSVIXXXXXXXXXXTH*IKAGRLKWRATTVVICDKKAPLKL-- 174
           V +  + +P+ ++F+Y G+VI          TH + A  +KWR  + V+CDKK   KL  
Sbjct: 492 VRLAAQVIPKKESFRYLGAVIQGSGDIDDDVTHRVGAAWMKWRLASGVLCDKKISPKLKG 551

Query: 175 -----AIRPAMLYGFEYWPVKKTQERKLEVAEMRMLRWTCGRTLLDRIPNEVFREELRVA 339
                 +RPA+LYG E WPVK     K+ VAEMRMLRW CG T  D+I NEV RE++ VA
Sbjct: 552 KFYRVVVRPALLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVA 611

Query: 340 PIIDKLREGRLRWFGHIR 393
            ++DKLRE RLRWFGH++
Sbjct: 612 SVVDKLREARLRWFGHVK 629


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/138 (47%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
 Frame = +1

Query: 1   VNIGGERVPESKNFKYFGSVIXXXXXXXXXXTH*IKAGRLKWRATTVVICDKKAPLKL-- 174
           V++ G+ VP+   F+Y GS++           H IKAG +KWR  + ++CDK+ P KL  
Sbjct: 367 VSLDGQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKG 426

Query: 175 -----AIRPAMLYGFEYWPVKKTQERKLEVAEMRMLRWTCGRTLLDRIPNEVFREELRVA 339
                AIRPA+LYG E WP K+   ++L VAEMRMLRW CG T  DR+ N+  R+ + VA
Sbjct: 427 KFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRVRNDDIRDRVGVA 486

Query: 340 PIIDKLREGRLRWFGHIR 393
           PI +KL + RLRWFGHI+
Sbjct: 487 PIAEKLVQHRLRWFGHIQ 504


>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
           gi|238014750|gb|ACR38410.1| unknown [Zea mays]
          Length = 215

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/138 (49%), Positives = 87/138 (63%), Gaps = 7/138 (5%)
 Frame = +1

Query: 1   VNIGGERVPESKNFKYFGSVIXXXXXXXXXXTH*IKAGRLKWRATTVVICDKKAPLKL-- 174
           V++ G+ VP+   F+Y GS++          +H IKAG LKWR    V+CD + P KL  
Sbjct: 15  VSLDGQVVPKKDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPRVPHKLKG 74

Query: 175 -----AIRPAMLYGFEYWPVKKTQERKLEVAEMRMLRWTCGRTLLDRIPNEVFREELRVA 339
                AIRPAMLYG E WP K+   ++L VAEMRMLRW CG T  DR+ N+  RE + VA
Sbjct: 75  KFYRTAIRPAMLYGAECWPTKRRHVQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVA 134

Query: 340 PIIDKLREGRLRWFGHIR 393
           PI +KL + RLRWFGHI+
Sbjct: 135 PIEEKLMQHRLRWFGHIQ 152


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