BLASTX nr result

ID: Atractylodes22_contig00031887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031887
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    71   1e-10
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...    67   2e-09

>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Cucumis sativus]
          Length = 532

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/57 (52%), Positives = 43/57 (75%)
 Frame = +2

Query: 11  DSLQRTRKLMKTRGLDKVPGCSSIEVGGIVNEFVAGEKMNHRIQEIHTLLGNLNRQL 181
           +  +R R +MK +G++KVPGCSSI+V G+VNEF+AGEK +  I  IH +L  LN+Q+
Sbjct: 460 EDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELNKQI 516


>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cucumis sativus]
          Length = 532

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/57 (52%), Positives = 43/57 (75%)
 Frame = +2

Query: 11  DSLQRTRKLMKTRGLDKVPGCSSIEVGGIVNEFVAGEKMNHRIQEIHTLLGNLNRQL 181
           +  +R R +MK +G++KVPGCSSI+V G+VNEF+AGEK +  I  IH +L  LN+Q+
Sbjct: 460 EDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEKTHRHIDNIHLVLEELNKQI 516


>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 26/57 (45%), Positives = 47/57 (82%)
 Frame = +2

Query: 11  DSLQRTRKLMKTRGLDKVPGCSSIEVGGIVNEFVAGEKMNHRIQEIHTLLGNLNRQL 181
           D ++R RK+M+ RG+DK PGCSS+++ G+V+EF+AGE+ + +++E+H +L  +N+Q+
Sbjct: 460 DHVRRIRKMMENRGVDKAPGCSSVKINGVVHEFIAGEETHLQMEEVHRVLEKMNKQM 516


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 27/55 (49%), Positives = 45/55 (81%)
 Frame = +2

Query: 20  QRTRKLMKTRGLDKVPGCSSIEVGGIVNEFVAGEKMNHRIQEIHTLLGNLNRQLD 184
           +R R +M+ +G+DK PGCSS+E+ G+V+EF+AGE+ + +++EIH++L  L+ QLD
Sbjct: 464 RRVRNMMRNKGVDKAPGCSSVEIDGVVSEFIAGEETHPQMEEIHSVLEILHMQLD 518


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/55 (47%), Positives = 44/55 (80%)
 Frame = +2

Query: 20  QRTRKLMKTRGLDKVPGCSSIEVGGIVNEFVAGEKMNHRIQEIHTLLGNLNRQLD 184
           +R R +MK +G +K PGCSS+E+ G+++EF+AGEK + +++EIH++L  ++ QLD
Sbjct: 468 RRVRDMMKIKGTNKAPGCSSVEIDGVISEFIAGEKTHPQMEEIHSVLKKMHMQLD 522


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