BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031839
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_002520617.1| pentatricopeptide repeat-containing protein,...   121   7e-26
ref|NP_193141.2| pentatricopeptide repeat-containing protein [Ar...   120   2e-25
ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   119   3e-25

>ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|222845929|gb|EEE83476.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/113 (52%), Positives = 79/113 (69%)
 Frame = +2

Query: 62  SILQILRFCATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEM 241
           S L  L+ C   +   + K +HA I+K GL+Q   LPNTL+  YGKC L++ A  LFDEM
Sbjct: 4   SYLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEM 63

Query: 242 PQRDPVSWASILTAYNQSNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCSA 400
           PQRD VSWASILTAYNQ+ L N+ LS+F   F  D L+PDH+++A+LL +C++
Sbjct: 64  PQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACAS 116



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/104 (29%), Positives = 52/104 (50%)
 Frame = +2

Query: 86  CATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQRDPVSW 265
           CA   +   GK +H  ++  G +    + N L+ +Y KC  I  A  +F+ M  RD VSW
Sbjct: 247 CANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSW 306

Query: 266 ASILTAYNQSNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCS 397
            SI+    Q   +  AL ++ D+ +   ++P+   F  L+ +CS
Sbjct: 307 TSIIVGAAQHGRAKEALDLY-DQMVLAEIKPNEVTFVGLIYACS 349


>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/107 (53%), Positives = 78/107 (72%)
 Frame = +2

Query: 77  LRFCATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQRDP 256
           L+ CA  +    GK LH HI+K G+DQ  +L N LI++YGKCGLI+ A+ LF+++P RDP
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69

Query: 257 VSWASILTAYNQSNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCS 397
           +SWASILTA NQ+NL +  LS+F   F  D L+PDHY+FA L+ +C+
Sbjct: 70  ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACA 116



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/95 (33%), Positives = 53/95 (55%)
 Frame = +2

Query: 113 GKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQRDPVSWASILTAYNQ 292
           GK +H  ++ +G +    + N L+ +Y KC  +  A ++F  M QRD VSW SI+    Q
Sbjct: 257 GKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQ 316

Query: 293 SNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCS 397
             L+  ALS++ +R +   L+P+   F  L+ +CS
Sbjct: 317 HGLAEEALSLY-NRMLSTGLKPNEVTFVGLIYACS 350


>ref|XP_002520617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540178|gb|EEF41753.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 344

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/111 (51%), Positives = 78/111 (70%)
 Frame = +2

Query: 68  LQILRFCATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQ 247
           L  L+ C   +     K LHA I+K+ L +   LPNTL++ YGKCGL++ A  LF+EMPQ
Sbjct: 7   LHQLQLCGKRQTPLTAKKLHAQIIKLSLKESEPLPNTLLNAYGKCGLLQDAYFLFEEMPQ 66

Query: 248 RDPVSWASILTAYNQSNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCSA 400
           RD VSWASILTAYN +NL N+ LS+F   FI D L PDH+++A+L+ +C++
Sbjct: 67  RDHVSWASILTAYNLANLPNKTLSIFPTMFIVDKLEPDHFVYATLVKACAS 117



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/82 (34%), Positives = 42/82 (51%)
 Frame = +2

Query: 86  CATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQRDPVSW 265
           CA   +   GK LH  I+ +G +    + N L+ +Y KC  I  A ++FD M  +D VSW
Sbjct: 248 CANLAVLEFGKQLHGLIIALGYESCLFISNALVDMYAKCSDILAAKEIFDRMIYKDVVSW 307

Query: 266 ASILTAYNQSNLSNRALSVFAD 331
            SI+    Q   +  AL ++ D
Sbjct: 308 TSIIVGAAQHGRAKEALDLYDD 329


>ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635650|sp|O23266.3|PP308_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
           gi|332657965|gb|AEE83365.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/110 (50%), Positives = 78/110 (70%)
 Frame = +2

Query: 68  LQILRFCATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQ 247
           L  L+ CA  R  +  K LHAHI+K+G+ Q   L NTL+++YGKCG   HA+Q+FDEMP 
Sbjct: 7   LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66

Query: 248 RDPVSWASILTAYNQSNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCS 397
           RD ++WAS+LTA NQ+NLS + LSVF+       LRPD ++F++L+ +C+
Sbjct: 67  RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACA 116



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/108 (29%), Positives = 55/108 (50%)
 Frame = +2

Query: 74  ILRFCATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQRD 253
           I+  CA    +  G+ +H  ++ +G D    + N LI +Y KC  +  A  +F  M  RD
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303

Query: 254 PVSWASILTAYNQSNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCS 397
            VSW S++    Q   + +AL+++ D   H  ++P+   F  L+ +CS
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHG-VKPNEVTFVGLIYACS 350


>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/111 (50%), Positives = 76/111 (68%)
 Frame = +2

Query: 68  LQILRFCATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQ 247
           L  L+ CA  +  S    LH+ I+K G D+   L NTL+ +YGKCGLI  A+QLFDEMP 
Sbjct: 7   LHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPN 66

Query: 248 RDPVSWASILTAYNQSNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCSA 400
           RD VSWASILTA+N++ +  R LS+    F HD L+PDH++FA ++ +CS+
Sbjct: 67  RDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSS 117



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/104 (30%), Positives = 54/104 (51%)
 Frame = +2

Query: 86  CATGRLTSHGKTLHAHILKIGLDQYGALPNTLISLYGKCGLIKHAVQLFDEMPQRDPVSW 265
           CA   L   GK +H  ++ +G +    + N L+ +Y KC  I  A  +F  MP++D +SW
Sbjct: 248 CANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISW 307

Query: 266 ASILTAYNQSNLSNRALSVFADRFIHDCLRPDHYIFASLLNSCS 397
            SI+    Q   +  AL+++ D  +   ++P+   F  LL +CS
Sbjct: 308 TSIIVGTAQHGKAEEALTLY-DEMVLSRIKPNEVTFVGLLYACS 350