BLASTX nr result

ID: Atractylodes22_contig00031787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031787
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26135.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002278027.1| PREDICTED: 50S ribosomal protein L33 [Vitis ...   100   9e-20
ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [C...    99   4e-19
ref|NP_001055710.1| Os05g0452600 [Oryza sativa Japonica Group] g...    99   4e-19
gb|ADR71262.1| 50S ribosomal protein L33A [Hevea brasiliensis]         97   2e-18

>emb|CBI26135.3| unnamed protein product [Vitis vinifera]
          Length = 101

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/56 (83%), Positives = 54/56 (96%)
 Frame = -3

Query: 352 EKKKSATLFIRLVSAAGTGFFYVKKKNPRRIQTKLEFRKYDPRVNRHVLFTEAKMK 185
           +KKK+A++FIRLVS+AGTGFFYVKKKNPR++  KLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 46  KKKKAASIFIRLVSSAGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 101


>ref|XP_002278027.1| PREDICTED: 50S ribosomal protein L33 [Vitis vinifera]
          Length = 59

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/56 (83%), Positives = 54/56 (96%)
 Frame = -3

Query: 352 EKKKSATLFIRLVSAAGTGFFYVKKKNPRRIQTKLEFRKYDPRVNRHVLFTEAKMK 185
           +KKK+A++FIRLVS+AGTGFFYVKKKNPR++  KLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 4   KKKKAASIFIRLVSSAGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 59


>ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [Cucumis sativus]
           gi|449488522|ref|XP_004158068.1| PREDICTED: 50S
           ribosomal protein L33-like [Cucumis sativus]
          Length = 57

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/58 (84%), Positives = 53/58 (91%)
 Frame = -3

Query: 358 MGEKKKSATLFIRLVSAAGTGFFYVKKKNPRRIQTKLEFRKYDPRVNRHVLFTEAKMK 185
           MG+KKK AT+FIRLVSAAGTGFFYVK+K P +I  KLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1   MGDKKKKATMFIRLVSAAGTGFFYVKRK-PTKITEKLEFRKYDPRVNRHVLFTEAKMK 57


>ref|NP_001055710.1| Os05g0452600 [Oryza sativa Japonica Group]
           gi|226493452|ref|NP_001150073.1| LOC100283702 [Zea mays]
           gi|242088467|ref|XP_002440066.1| hypothetical protein
           SORBIDRAFT_09g025380 [Sorghum bicolor]
           gi|357133012|ref|XP_003568122.1| PREDICTED: 50S
           ribosomal protein L33-like [Brachypodium distachyon]
           gi|357136557|ref|XP_003569870.1| PREDICTED: 50S
           ribosomal protein L33-like [Brachypodium distachyon]
           gi|113579261|dbj|BAF17624.1| Os05g0452600 [Oryza sativa
           Japonica Group] gi|195629488|gb|ACG36385.1| 50S
           ribosomal protein L33 [Zea mays]
           gi|195636476|gb|ACG37706.1| 50S ribosomal protein L33
           [Zea mays] gi|195637860|gb|ACG38398.1| 50S ribosomal
           protein L33 [Zea mays] gi|195656701|gb|ACG47818.1| 50S
           ribosomal protein L33 [Zea mays]
           gi|218196895|gb|EEC79322.1| hypothetical protein
           OsI_20170 [Oryza sativa Indica Group]
           gi|218197095|gb|EEC79522.1| hypothetical protein
           OsI_20605 [Oryza sativa Indica Group]
           gi|222632209|gb|EEE64341.1| hypothetical protein
           OsJ_19181 [Oryza sativa Japonica Group]
           gi|223975085|gb|ACN31730.1| unknown [Zea mays]
           gi|241945351|gb|EES18496.1| hypothetical protein
           SORBIDRAFT_09g025380 [Sorghum bicolor]
           gi|413946041|gb|AFW78690.1| hypothetical protein
           ZEAMMB73_147625 [Zea mays] gi|413946042|gb|AFW78691.1|
           hypothetical protein ZEAMMB73_147625 [Zea mays]
           gi|413946043|gb|AFW78692.1| hypothetical protein
           ZEAMMB73_147625 [Zea mays] gi|413946044|gb|AFW78693.1|
           hypothetical protein ZEAMMB73_147625 [Zea mays]
          Length = 57

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/55 (85%), Positives = 51/55 (92%)
 Frame = -3

Query: 349 KKKSATLFIRLVSAAGTGFFYVKKKNPRRIQTKLEFRKYDPRVNRHVLFTEAKMK 185
           K K A++FIRLVSAAGTGFFYVK+KNPRRI  KLEFRKYDPRVN+HVLFTEAKMK
Sbjct: 3   KAKRASIFIRLVSAAGTGFFYVKRKNPRRITEKLEFRKYDPRVNKHVLFTEAKMK 57


>gb|ADR71262.1| 50S ribosomal protein L33A [Hevea brasiliensis]
          Length = 62

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/58 (79%), Positives = 52/58 (89%)
 Frame = -3

Query: 358 MGEKKKSATLFIRLVSAAGTGFFYVKKKNPRRIQTKLEFRKYDPRVNRHVLFTEAKMK 185
           MG+KKK   +FIRLVSAAGTGFFYVK+K+ ++I  KLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 5   MGDKKKKTFMFIRLVSAAGTGFFYVKRKSFKKITEKLEFRKYDPRVNRHVLFTEAKMK 62


Top