BLASTX nr result
ID: Atractylodes22_contig00031758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00031758
(288 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2... 81 2e-19
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,... 75 6e-18
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-17
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi... 74 1e-16
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar... 64 2e-12
>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
predicted protein [Populus trichocarpa]
Length = 707
Score = 80.9 bits (198), Expect(2) = 2e-19
Identities = 35/63 (55%), Positives = 51/63 (80%)
Frame = -1
Query: 288 EEILVKLMENGLVPTEVFFNTIVDGHCREGNTDMALLTMEKMKSHGLNPSCSTFNSVINH 109
EE+L L+E+GLVP EV +NTIV+G+C+ G+ D A+LT+E+M+S GL P+C FNSVI+
Sbjct: 262 EEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDK 321
Query: 108 YCQ 100
+C+
Sbjct: 322 FCE 324
Score = 39.3 bits (90), Expect(2) = 2e-19
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 86 WMKRMAEMGASPDVVTYNILLDGFGR 9
W+K+M G +P V TYNIL+DG+GR
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDGYGR 359
Score = 57.8 bits (138), Expect(2) = 3e-07
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = -1
Query: 288 EEILVKLMENGLVPTEVFFNTIVDGHCREGNTDMALLTMEKMKSHGLNPSCSTFNSVINH 109
E++ ++ LVP V FNT++DG+C+ G D+A+ E+MK + PS TFNS+++
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 108 YCQS 97
C++
Sbjct: 181 LCKA 184
Score = 21.6 bits (44), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 62 GASPDVVTYNILLDGFGRS 6
G PD TY+I+ DG +S
Sbjct: 201 GFVPDGFTYSIIFDGLLKS 219
>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 817
Score = 74.7 bits (182), Expect(2) = 6e-18
Identities = 35/72 (48%), Positives = 50/72 (69%)
Frame = -1
Query: 288 EEILVKLMENGLVPTEVFFNTIVDGHCREGNTDMALLTMEKMKSHGLNPSCSTFNSVINH 109
EEIL K ENGLV EV +NT V+G+CR G+ + A+LT+E+M+S GL P+ TFNS+I+
Sbjct: 371 EEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDK 430
Query: 108 YCQSGNLVDEED 73
+C + E+
Sbjct: 431 FCDMKEMDKAEE 442
Score = 40.8 bits (94), Expect(2) = 6e-18
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -2
Query: 86 WMKRMAEMGASPDVVTYNILLDGFGR 9
W+K+MAE G +P V TYN L+DG+G+
Sbjct: 443 WVKKMAEKGVTPSVETYNTLIDGYGK 468
Score = 46.6 bits (109), Expect(2) = 4e-06
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = -1
Query: 288 EEILVKLMENGLVPTEVFFNTIVDGHCREGNTDMALLTMEKMKSHGLNPSCSTFNSVINH 109
E +L ++ G++P +N ++DG C G AL ++M ++P+ T+N +I+
Sbjct: 511 EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570
Query: 108 YCQSGNLVDEED 73
C+ G L + ED
Sbjct: 571 LCKKGKLTEAED 582
Score = 28.9 bits (63), Expect(2) = 4e-06
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 86 WMKRMAEMGASPDVVTYNILLDGFGRS 6
++ ++ G SPDV+TYN L+ G+ +
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANA 609
>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 75.9 bits (185), Expect(2) = 4e-17
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = -1
Query: 288 EEILVKLMENGLVPTEVFFNTIVDGHCREGNTDMALLTMEKMKSHGLNPSCSTFNSVINH 109
EE+L K +ENGL P VFFNTIV+G+C+ G+ + A T+EKM++ GL P+ T+NS++
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436
Query: 108 YCQSGNLVDEE 76
+C+ N+ + E
Sbjct: 437 FCEMKNMEEAE 447
Score = 37.0 bits (84), Expect(2) = 4e-17
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 83 MKRMAEMGASPDVVTYNILLDGFGRS 6
+K+M E G P+V TYN L+DG+GRS
Sbjct: 450 IKKMVEKGVLPNVETYNTLIDGYGRS 475
>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 73.6 bits (179), Expect(2) = 1e-16
Identities = 29/67 (43%), Positives = 51/67 (76%)
Frame = -1
Query: 288 EEILVKLMENGLVPTEVFFNTIVDGHCREGNTDMALLTMEKMKSHGLNPSCSTFNSVINH 109
EE+L KL+ENG+ P+++ +N +V+ +C+EG+ A+LT E+M+ GL P+ TFN+VI+
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISK 404
Query: 108 YCQSGNL 88
+C++G +
Sbjct: 405 FCETGEV 411
Score = 37.4 bits (85), Expect(2) = 1e-16
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -2
Query: 86 WMKRMAEMGASPDVVTYNILLDGFGR 9
W++RM E G SP V TYN L++G+G+
Sbjct: 417 WVRRMVEKGVSPTVETYNSLINGYGQ 442
>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product
[Arabidopsis thaliana] gi|28973713|gb|AAO64173.1|
unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis
thaliana] gi|110737169|dbj|BAF00534.1| hypothetical
protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 64.3 bits (155), Expect(2) = 2e-12
Identities = 28/71 (39%), Positives = 45/71 (63%)
Frame = -1
Query: 288 EEILVKLMENGLVPTEVFFNTIVDGHCREGNTDMALLTMEKMKSHGLNPSCSTFNSVINH 109
EEIL + M GLVP EV +NT++DG+CR+G+ A + +E M+ G+ P +N +I
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 108 YCQSGNLVDEE 76
+C+ G + + E
Sbjct: 434 FCELGEMENAE 444
Score = 32.3 bits (72), Expect(2) = 2e-12
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 83 MKRMAEMGASPDVVTYNILLDGFGRSF 3
+ +M G SP V TYNIL+ G+GR +
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKY 473
Score = 54.3 bits (129), Expect(2) = 3e-08
Identities = 21/72 (29%), Positives = 46/72 (63%)
Frame = -1
Query: 288 EEILVKLMENGLVPTEVFFNTIVDGHCREGNTDMALLTMEKMKSHGLNPSCSTFNSVINH 109
E++ +++ L+P+ + +NT++DG+C+ GN + + E+MK+ + PS TFN+++
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 108 YCQSGNLVDEED 73
++G + D E+
Sbjct: 294 LFKAGMVEDAEN 305
Score = 28.1 bits (61), Expect(2) = 3e-08
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 83 MKRMAEMGASPDVVTYNILLDGF 15
+K M ++G PD T++IL DG+
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGY 329