BLASTX nr result

ID: Atractylodes22_contig00031680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031680
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...    66   3e-09
ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...    62   5e-08
ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-a...    62   5e-08
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...    59   5e-07

>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Vitis vinifera]
          Length = 1013

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
 Frame = +3

Query: 3   VAKEVPTKTFGEXXXXXXXXXXXHRLSSEFA-NKKRKQP-HVSKKGKKGRKGIDSSEIDC 176
           V  EVP +   +           + LSSEF+ NKKRK+P +VSK+GKKGRKGIDSS ID 
Sbjct: 454 VTNEVPKQPLVDDDEGDERNGEKYGLSSEFSVNKKRKKPSNVSKRGKKGRKGIDSSSIDY 513

Query: 177 S-GTLAKVHWFRVIL 218
             G LA+V WFRVIL
Sbjct: 514 DCGPLARVGWFRVIL 528


>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +3

Query: 3   VAKEVPTKTFGEXXXXXXXXXXXHRLSSEFA-NKKRKQP-HVSKKGKKGRKGIDSSEIDC 176
           V  EVP +   E             LSSEF+ +KKRK+P + +KK KKG KGIDSS I+C
Sbjct: 443 VTNEVPKQPLVEEDDIDEKMGERFGLSSEFSVSKKRKKPFNGNKKSKKGGKGIDSSSIEC 502

Query: 177 -SGTLAKVHWFRVIL 218
            SG LAKV WFRVIL
Sbjct: 503 GSGPLAKVGWFRVIL 517


>ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Glycine max]
          Length = 975

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = +3

Query: 3   VAKEVPTKTFGEXXXXXXXXXXXHRLSSEFA-NKKRKQP-HVSKKGKKGRKGIDSSEIDC 176
           V  EVP +   E             LSSEF+ +KKRK+P + +KK KKG KGIDSS I+C
Sbjct: 410 VTNEVPKQPLVEDDDIDGKNGERFGLSSEFSVSKKRKKPFNGNKKSKKGGKGIDSSSIEC 469

Query: 177 -SGTLAKVHWFRVIL 218
            SG LAKV WFRVIL
Sbjct: 470 GSGPLAKVGWFRVIL 484


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   VAKEVPTKTFGEXXXXXXXXXXXHRLSSEFANKKRKQPHVSKKGKKGRKGIDSSEIDCS- 179
           V  EVP +   +           H LSSEF+N K+++       K+GRKG+DSS IDC  
Sbjct: 368 VTNEVPKQPLVDEDEADDKNGEKHGLSSEFSNNKKRKKTSKVSKKRGRKGMDSSSIDCDF 427

Query: 180 GTLAKVHWFRVIL 218
           G LA+V W RVIL
Sbjct: 428 GALARVSWSRVIL 440


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