BLASTX nr result

ID: Atractylodes22_contig00031587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031587
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
emb|CBI39966.3| unnamed protein product [Vitis vinifera]              156   2e-36
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]   154   7e-36
ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|NP_187008.1| pentatricopeptide repeat-containing protein [Ar...   136   2e-30

>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein At3g03580-like
            [Vitis vinifera]
          Length = 889

 Score =  156 bits (394), Expect = 2e-36
 Identities = 70/77 (90%), Positives = 76/77 (98%)
 Frame = +1

Query: 1    EKREILCGHSERLAIAFGLLNTKPGTPLQVMKNVRVCEDCHTVTKYITKIVQREILVRDA 180
            EKR+ILCGHSERLAIAFGLLNTKPGTPLQVMKN+RVCEDCHTVTKYI+KIVQRE+LVRDA
Sbjct: 813  EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDA 872

Query: 181  NRFHFFKNGSCSCGDYW 231
            NRFH FK+G+CSCGDYW
Sbjct: 873  NRFHVFKDGACSCGDYW 889


>emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  156 bits (394), Expect = 2e-36
 Identities = 70/77 (90%), Positives = 76/77 (98%)
 Frame = +1

Query: 1   EKREILCGHSERLAIAFGLLNTKPGTPLQVMKNVRVCEDCHTVTKYITKIVQREILVRDA 180
           EKR+ILCGHSERLAIAFGLLNTKPGTPLQVMKN+RVCEDCHTVTKYI+KIVQRE+LVRDA
Sbjct: 650 EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDA 709

Query: 181 NRFHFFKNGSCSCGDYW 231
           NRFH FK+G+CSCGDYW
Sbjct: 710 NRFHVFKDGACSCGDYW 726


>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  154 bits (389), Expect = 7e-36
 Identities = 69/77 (89%), Positives = 75/77 (97%)
 Frame = +1

Query: 1    EKREILCGHSERLAIAFGLLNTKPGTPLQVMKNVRVCEDCHTVTKYITKIVQREILVRDA 180
            EKR+ILCGHSERLAIAFGLLNTKPGTPLQVMKN+RVCEDCHTVTKYI+KI QRE+LVRDA
Sbjct: 872  EKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDA 931

Query: 181  NRFHFFKNGSCSCGDYW 231
            NRFH FK+G+CSCGDYW
Sbjct: 932  NRFHVFKDGACSCGDYW 948


>ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein At3g03580-like
            [Cucumis sativus]
          Length = 895

 Score =  145 bits (366), Expect = 3e-33
 Identities = 65/77 (84%), Positives = 74/77 (96%)
 Frame = +1

Query: 1    EKREILCGHSERLAIAFGLLNTKPGTPLQVMKNVRVCEDCHTVTKYITKIVQREILVRDA 180
            +KR++LCGHSERLAIAFGLLNTKPG+PL VMKN+RVC DCHTVTKYITKI+QREILVRDA
Sbjct: 819  DKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDA 878

Query: 181  NRFHFFKNGSCSCGDYW 231
            NRFH FK+G+CSCGD+W
Sbjct: 879  NRFHRFKDGACSCGDHW 895


>ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g03580 gi|6091764|gb|AAF03474.1|AC009327_13
            hypothetical protein [Arabidopsis thaliana]
            gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis
            thaliana] gi|29824355|gb|AAP04138.1| unknown protein
            [Arabidopsis thaliana] gi|332640438|gb|AEE73959.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 882

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/77 (80%), Positives = 69/77 (89%)
 Frame = +1

Query: 1    EKREILCGHSERLAIAFGLLNTKPGTPLQVMKNVRVCEDCHTVTKYITKIVQREILVRDA 180
            EKR ++CGHSERLAIAFGLLNT+PGTPLQVMKN+RVC DCH VTK I+KIV REILVRDA
Sbjct: 806  EKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDA 865

Query: 181  NRFHFFKNGSCSCGDYW 231
            NRFH FK+G+CSC D W
Sbjct: 866  NRFHLFKDGTCSCKDRW 882


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