BLASTX nr result

ID: Atractylodes22_contig00031550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031550
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326884.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
emb|CAN83231.1| hypothetical protein VITISV_018480 [Vitis vinifera]    92   9e-17
ref|XP_002881966.1| protein binding protein [Arabidopsis lyrata ...    86   5e-15
ref|NP_001078058.1| RING/U-box domain-containing protein [Arabid...    85   1e-14
ref|XP_002878320.1| hypothetical protein ARALYDRAFT_486484 [Arab...    84   2e-14

>ref|XP_002326884.1| predicted protein [Populus trichocarpa] gi|222835199|gb|EEE73634.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 7/139 (5%)
 Frame = -3

Query: 539 MEEEQIEVIIAKLSTTAVLILTNKFNILITFVAVHILRRILKTIHHRHQFPIIT------ 378
           M ++++E+++ K+++  +    N  N ++    +  +R   + +  ++  P  T      
Sbjct: 1   MMKDEMELVMRKVAS-CIAATANCKNTIVIIAIIFAIRLCTEVLWRKNHIPSFTFRQKHH 59

Query: 377 -AKPTATKTVYCAVCLHDVDGGQRYRRLPQCRHCFHVNCIDTWLQSRSTCPLCRNQIPPH 201
             K    +T YC VCLH+V  G+R R+L +C+HCFHV CID W QS STCPLCRNQ+   
Sbjct: 60  PIKNDDYETPYCVVCLHEVVDGERLRKLLKCKHCFHVACIDAWFQSHSTCPLCRNQVLLR 119

Query: 200 LLPQKQQKEPGFLYMFIYF 144
              Q Q ++    + F+ F
Sbjct: 120 HDHQHQNEKRCLFFHFLSF 138


>emb|CAN83231.1| hypothetical protein VITISV_018480 [Vitis vinifera]
          Length = 357

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = -3

Query: 515 IIAKLSTTAVLILTNKFNILITFVAVHILRRILKTIHHRHQFPIITAKPTATKT-VYCAV 339
           +++ +++     LT    I IT    +  R++LK  H      +   KP  T   +YC V
Sbjct: 12  VVSTVASAVTTHLTLVIAITITITFGYYRRKVLKRDH------VFCYKPNRTHXZIYCVV 65

Query: 338 CLHDVDGGQRYRRLPQCRHCFHVNCIDTWLQSRSTCPLCRNQIPPHLLPQKQQ 180
           CL D   G+R RRLP C+HCFHV CID W Q+ STCPLCR+Q+    LP ++Q
Sbjct: 66  CLCDAVEGERLRRLPDCKHCFHVGCIDAWFQAHSTCPLCRSQVS---LPHRRQ 115


>ref|XP_002881966.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327805|gb|EFH58225.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 34/70 (48%), Positives = 47/70 (67%)
 Frame = -3

Query: 413 TIHHRHQFPIITAKPTATKTVYCAVCLHDVDGGQRYRRLPQCRHCFHVNCIDTWLQSRST 234
           T+HHR ++   TA+   +   YC +CL D   G++ RR+  C HCFH +CID WL+ +ST
Sbjct: 49  TVHHRRRWRKTTAEEKHSSP-YCTICLEDAAEGEKMRRITTCNHCFHADCIDPWLEKKST 107

Query: 233 CPLCRNQIPP 204
           CPLCR +IPP
Sbjct: 108 CPLCRAEIPP 117


>ref|NP_001078058.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|330255347|gb|AEC10441.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 145

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
 Frame = -3

Query: 521 EVIIAKLSTTAVLILTNK-FNILITFVAVHILRRILK-TIHHRHQFPIITAKPTATKTVY 348
           ++I   +   +V++LT + F     F+A    RR    T+ HR ++   TA      + Y
Sbjct: 11  QIIAESVIIASVVVLTLRLFFRFACFLASRSWRRYRTFTVQHRRRWRK-TAAEEKHSSPY 69

Query: 347 CAVCLHDVDGGQRYRRLPQCRHCFHVNCIDTWLQSRSTCPLCRNQIPP 204
           C +CL D   G++ RR+  C HCFHV+CID WL  +STCPLCR +IPP
Sbjct: 70  CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPP 117


>ref|XP_002878320.1| hypothetical protein ARALYDRAFT_486484 [Arabidopsis lyrata subsp.
           lyrata] gi|297324158|gb|EFH54579.1| hypothetical protein
           ARALYDRAFT_486484 [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
 Frame = -3

Query: 464 NILITFVAVHILRR---ILKTIHHRHQ-FPI---ITAKPTATKTVYCAVCLHDVDGGQRY 306
           ++L+T VAV  LR    I+     RH+ F     ITA    +   +CAVCL + + G++ 
Sbjct: 16  SVLVTSVAVFSLRFATFIVTRPWRRHRTFTFRRWITAANDHSSPPFCAVCLQEAEEGEKM 75

Query: 305 RRLPQCRHCFHVNCIDTWLQSRSTCPLCRNQIPPHLLPQKQQKEPGFLYMFIYF 144
           +RL  CRHCFH +CIDTWL   S CPLCR QIPP  LP      P    +F++F
Sbjct: 76  KRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPP--LP------PASPLLFLFF 121


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