BLASTX nr result

ID: Atractylodes22_contig00031487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00031487
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...    80   5e-13
gb|AFW66234.1| hypothetical protein ZEAMMB73_046571 [Zea mays]         74   3e-11
ref|XP_002451700.1| hypothetical protein SORBIDRAFT_04g006240 [S...    73   6e-11
ref|XP_003571114.1| PREDICTED: methyl-CpG-binding domain-contain...    72   1e-10
ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...    71   2e-10

>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 24/252 (9%)
 Frame = -1

Query: 711  SSTWCLFQSDEEISNLVDYQRRNEAAEIKLRDSILQWQKSMLQSGQRTKRNLVDSHNVSS 532
            SS W  +++D EI  L+ +   N   EI+L++SI+QW K   Q  QR +  + +      
Sbjct: 1636 SSAWVSYETDAEIEELIGWLGNNNQKEIELKESIMQWLKLRFQESQRIRDPVQEECRAGL 1695

Query: 531  ADMK---KSLSRNCLAAKTTVLLEAKYS--LEPDASRDL*RRQEERI*QNG----TCVFV 379
            + ++   ++   NCL  K T+LLE  Y   +E D S  L +R ++    N      C  +
Sbjct: 1696 STIRNNDQTAFSNCL-TKATLLLEKNYGAFVELDTSDMLKKRGKKARGTNEEKTYRCDCL 1754

Query: 378  *ILFCHLDTTVKCRTTFFTNVEYEQHKHSSC-----GHSSLAENNKVYVGKSSDKSQ--- 223
             +++   +    C  T   +VE+E H    C           E N    G+ + K++   
Sbjct: 1755 ELIWPSRNHCYSCHRTSSNDVEFEGHSDGRCSSVPQSREKSEETNDSLKGRGNVKAEVTW 1814

Query: 222  RESIFEIKVFDSLKTRPSVLVGRLVGDQNDAIVC-------TNKASSNDSNKKRVNIAGL 64
            +E   EI    S     S L  RL+  QN+ I C        +K  + DSNK+ V   GL
Sbjct: 1815 KEKKSEIDKLHSSMGGLSELRARLIKFQNEGINCPYDLLDICSKFVTEDSNKELVQDIGL 1874

Query: 63   IAANGNPYVVLS 28
            I +NG P  V S
Sbjct: 1875 IGSNGIPPFVTS 1886


>gb|AFW66234.1| hypothetical protein ZEAMMB73_046571 [Zea mays]
          Length = 1812

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
 Frame = -1

Query: 762  SEISPSDRP----ANHSQSRYSSTW-----CLFQSDEEISNLVDYQRRNEAAEIKLRDSI 610
            S + P DR      +HSQS +   W      +++SDEE+  LVD+ R  +  E  L+DSI
Sbjct: 1326 SMMIPKDRDISMVTSHSQSTFDRGWNSASLVIYESDEEMKCLVDWLRDIDPREKDLKDSI 1385

Query: 609  LQWQKSMLQSGQRTKRNLVDSHNVSSADMKKSLSRNCLAAKTTVLLEAKYSLEPDA-SRD 433
            L WQKS+ +       +   S    S  + +  + N       ++LE KY L+ D  + +
Sbjct: 1386 LHWQKSIYRQASFPITDPPVSKFSKSEPLMELPNTNAF-----IVLEQKYGLQTDQDTSE 1440

Query: 432  L*RRQ--------EERI*QNGTCVFV*ILFCHLDTTVKCRTTFFTNVEYEQHKHSSCGHS 277
            L +R+        EER+ +   C  +  ++      + C  T+ T +EYE H    C  S
Sbjct: 1441 LSKRRGTKSRSGSEERVYR---CDCLEPIWPSRHHCLNCHETYLTLMEYEGHNGGKCTSS 1497

Query: 276  SLAENNKVYVGKSSDKSQRESIFE-IKVFDSLKTRPSVLVGRLVGDQNDAIVCTNKASSN 100
            +   N    + +   K  +  I E   V  +    PS   G+L     D      K ++N
Sbjct: 1498 NDCPNESKEIDEPKLKGSKSDIKEKDPVVHNCSVEPS-NSGKLESCPYDFEEICRKFTTN 1556

Query: 99   DSNKKRVNIAGLIAANGNPYVVLS 28
            DS K+ V   GL+ +NG P  V S
Sbjct: 1557 DSIKETVKEIGLLGSNGIPSCVPS 1580


>ref|XP_002451700.1| hypothetical protein SORBIDRAFT_04g006240 [Sorghum bicolor]
            gi|241931531|gb|EES04676.1| hypothetical protein
            SORBIDRAFT_04g006240 [Sorghum bicolor]
          Length = 1872

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 78/263 (29%), Positives = 112/263 (42%), Gaps = 18/263 (6%)
 Frame = -1

Query: 762  SEISPSDRP----ANHSQSRYSSTW-----CLFQSDEEISNLVDYQRRNEAAEIKLRDSI 610
            S + P DR      +HSQS +   W      +++SDEEI +LVD+ R  +  E  L+DSI
Sbjct: 1392 SMLIPKDRDISMVTSHSQSTFDKGWNSASLVMYESDEEIKSLVDWLRDIDPREKDLKDSI 1451

Query: 609  LQWQKSMLQSGQRTKRNLVDSHNVSSADMKKSLSRNCLAAKTTVLLEAKY--SLEPDASR 436
            L WQKS+       + +   +    S   K          K  ++LE KY   L+ D S 
Sbjct: 1452 LHWQKSLYH-----QASFPITDPPVSKSSKSEPPMELPNTKAFIVLEQKYGPQLDQDTSE 1506

Query: 435  DL*RR-------QEERI*QNGTCVFV*ILFCHLDTTVKCRTTFFTNVEYEQHKHSSCGHS 277
               RR        EER+     C+   + F H    + C  T+ T  EYE H    C  S
Sbjct: 1507 LSKRRGSKSKSGSEERV-YRCDCLEPLLPFRH--HCLNCHETYLTLTEYEGHNGVKCNSS 1563

Query: 276  SLAENNKVYVGKSSDKSQRESIFEIKVFDSLKTRPSVLVGRLVGDQNDAIVCTNKASSND 97
                N+     K +D+ + +   +  V  +    PS   G+L     D      K  +ND
Sbjct: 1564 ----NDCPTESKENDEPKLKGTKD-PVDHNCSIEPS-NSGKLESCPYDFEEICRKFITND 1617

Query: 96   SNKKRVNIAGLIAANGNPYVVLS 28
            SNK+ V   GL+ +NG P  V S
Sbjct: 1618 SNKETVKEIGLLGSNGIPSFVPS 1640


>ref|XP_003571114.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Brachypodium distachyon]
          Length = 924

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 19/254 (7%)
 Frame = -1

Query: 732  NHSQSRYSSTW-----CLFQSDEEISNLVDYQRRNEAAEIKLRDSILQWQKSMLQSGQRT 568
            N+  S +   W      +++SDEEI  LVD+ +  +  + +L+D+ILQWQ+     G   
Sbjct: 454  NYDASLFHKGWNSASIFIYESDEEIRYLVDWLKDYDPRDKELKDAILQWQRHHNHQGGYL 513

Query: 567  KRNLVD--SHNVSSADMKKSLSRNCLAAKTTVLLEAKYSLEPDASRDL*RRQEERI*QNG 394
            +   V   S N    D+         + K  V+LE KY L+ D       R+  R    G
Sbjct: 514  RDPPVSILSKNEQLMDLP--------STKAAVVLEQKYGLQLDQDTSNLSRRRGRKTNIG 565

Query: 393  T------CVFV*ILFCHLDTTVKCRTTFFTNVEYEQHKHSSCGHSSLA-----ENNKVYV 247
            +      C  +  ++      + C  T+FT+ EYE H    C  +S +     EN+++ V
Sbjct: 566  SEERTYRCDCLEPVWPSRHHCLTCHETYFTSSEYEGHNSGKCNRNSHSPSESKENDELKV 625

Query: 246  -GKSSDKSQRESIFEIKVFDSLKTRPSVLVGRLVGDQNDAIVCTNKASSNDSNKKRVNIA 70
                SD  +++S+      +S  +R      +L     D      K  +NDSNK+ V   
Sbjct: 626  KSAKSDIKEKDSLDRSSAIESSSSR------KLNSCPYDFEEICRKFVTNDSNKEIVKDI 679

Query: 69   GLIAANGNPYVVLS 28
            GLI +NG P  V S
Sbjct: 680  GLIGSNGVPSFVPS 693


>ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing
            protein 9-like [Cucumis sativus]
          Length = 1277

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 27/244 (11%)
 Frame = -1

Query: 693  FQSDEEISNLVDYQRRNEAAEIKLRDSILQWQKSMLQSGQRTKRNLVDSH---NVSSADM 523
            +Q++ +I  L+D+ + ++  E +L++SILQW K  LQ+  R+     +     + SS+D+
Sbjct: 775  YQTEADILELIDWLKDSDPKERELKESILQWLKPKLQTSSRSNNQSPEEQLKDSSSSSDV 834

Query: 522  KKSLSRNCLAAKTTVLLEAKYS------LEPDASRDL*RRQEERI*QNGTCVFV*ILFCH 361
            +K      L  + + LLE+KY          D +R L + +     +   CV +  ++  
Sbjct: 835  EKLECSGFLVNRASALLESKYGPFLEFVTPDDLNRWLDKARLAEDEKMFRCVCMEPVWPS 894

Query: 360  LDTTVKCRTTFFTNVEYEQHKHSSCGHSSLAENNKVYVGKSSDKSQRESIFEIKVFDSLK 181
                + C  +F T+VE E+H +  C     + +    VG SS KS+    FE K  +S  
Sbjct: 895  RYHCLSCHKSFSTDVELEEHDNGQCSSLPASCDGIKEVGDSS-KSKCNIKFESKQEES-- 951

Query: 180  TRPSVLVGR-----------LVGDQNDAIVC-------TNKASSNDSNKKRVNIAGLIAA 55
               S+++             L+  QND ++C        +K  + DSNK  +   GLI++
Sbjct: 952  --SSMVIAETSRGYFNHSMGLIKYQNDGMMCPYDFELICSKFLTKDSNKDLIKEIGLISS 1009

Query: 54   NGNP 43
            NG P
Sbjct: 1010 NGVP 1013


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